RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 PDCL2Q8N4E4 241 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 TAF4BQ92750 862 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 DUSP9Q99956 384 aaKnown RBP21.51■■□□□ 1.03
NPHP4-206ENST00000468253 XYLT2Q9H1B5 865 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 METTL14Q9HCE5 456 aaKnown RBP21.51■■□□□ 1.03
NPHP4-206ENST00000468253 HSFX1Q9UBD0 423 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 L1RE1Q9UN81 338 aa21.51■■□□□ 1.03
NPHP4-206ENST00000468253 ANK1P16157 1881 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 C19orf67A6NJJ6 358 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 ARPP19P56211 112 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 PAK1Q13153 545 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 BIRC3Q13489 604 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 NCOA4Q13772 614 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 SOWAHAQ2M3V2 549 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 CT47A1Q5JQC4 288 aaPredicted RBP21.5■■□□□ 1.03
NPHP4-206ENST00000468253 KLHL10Q6JEL2 608 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 FRMD5Q7Z6J6 570 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 UHRF1Q96T88 793 aaPredicted RBP21.5■■□□□ 1.03
NPHP4-206ENST00000468253 RTP3Q9BQQ7 232 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 ACBD6Q9BR61 282 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 ZCWPW1Q9H0M4 648 aa21.5■■□□□ 1.03
NPHP4-206ENST00000468253 TACC1O75410 805 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 RFPL2O75678 378 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 VNN1O95497 513 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 FGFR1OPO95684 399 aaKnown RBP21.49■■□□□ 1.03
NPHP4-206ENST00000468253 C8AP07357 584 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 MYL6P60660 151 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 WDR72Q3MJ13 1102 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 PPM1LQ5SGD2 360 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 C2orf15Q8WU43 125 aaKnown RBP21.49■■□□□ 1.03
NPHP4-206ENST00000468253 ZNF707Q96C28 371 aaPredicted RBP21.49■■□□□ 1.03
NPHP4-206ENST00000468253 EEF2KMTQ96G04 330 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 APOL5Q9BWW9 433 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 TMEM8AQ9HCN3 771 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 ARMCX3Q9UH62 379 aaPredicted RBP21.49■■□□□ 1.03
NPHP4-206ENST00000468253 RWDD2AQ9UIY3 292 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 VWA8A3KMH1 1905 aa21.49■■□□□ 1.03
NPHP4-206ENST00000468253 TRIM49BA6NDI0 452 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 XYLBO75191 536 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 GNA14O95837 355 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 CPB1P15086 417 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 MYL7Q01449 175 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 ZP2Q05996 745 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 PPP3CAQ08209 521 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 ADCY1Q08828 1119 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 RNF19BQ6ZMZ0 732 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 RBM43Q6ZSC3 357 aaKnown RBP21.48■■□□□ 1.03
NPHP4-206ENST00000468253 DCP1BQ8IZD4 617 aaKnown RBP21.48■■□□□ 1.03
NPHP4-206ENST00000468253 USTQ9Y2C2 406 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 SCN1AP35498 2009 aa21.48■■□□□ 1.03
NPHP4-206ENST00000468253 WARSP23381 471 aaKnown RBP21.47■■□□□ 1.03
NPHP4-206ENST00000468253 PCSK1P29120 753 aa21.47■■□□□ 1.03
NPHP4-206ENST00000468253 KRT39Q6A163 491 aa21.47■■□□□ 1.03
NPHP4-206ENST00000468253 ADGRF2Q8IZF7 708 aa21.47■■□□□ 1.03
NPHP4-206ENST00000468253 OR10T2Q8NGX3 314 aa21.47■■□□□ 1.03
NPHP4-206ENST00000468253 SLC7A14Q8TBB6 771 aa21.47■■□□□ 1.03
NPHP4-206ENST00000468253 SMG7Q92540 1137 aaKnown RBP21.47■■□□□ 1.03
NPHP4-206ENST00000468253 FAXDC2Q96IV6 333 aa21.47■■□□□ 1.03
NPHP4-206ENST00000468253 MMS19Q96T76 1030 aa21.47■■□□□ 1.03
NPHP4-206ENST00000468253 COL25A1Q9BXS0 654 aaPredicted RBP21.47■■□□□ 1.03
NPHP4-206ENST00000468253 CYP4F11Q9HBI6 524 aa21.47■■□□□ 1.03
NPHP4-206ENST00000468253 WDR6Q9NNW5 1121 aaKnown RBP21.47■■□□□ 1.03
NPHP4-206ENST00000468253 LOC730098B7Z3J9 87 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 PRRG1O14668 218 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 PMM2O15305 246 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 SEC24AO95486 1093 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 ASS1P00966 412 aaKnown RBP21.46■■□□□ 1.03
NPHP4-206ENST00000468253 P4HA1P13674 534 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 ERCC5P28715 1186 aaPredicted RBP21.46■■□□□ 1.03
NPHP4-206ENST00000468253 GCLMP48507 274 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 TUFMP49411 452 aaKnown RBP21.46■■□□□ 1.03
NPHP4-206ENST00000468253 NLRP12P59046 1061 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 TNNC1P63316 161 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 TSPY1Q01534 308 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 NFE2Q16621 373 aaPredicted RBP21.46■■□□□ 1.03
NPHP4-206ENST00000468253 GJD3Q8N144 294 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 PIDD1Q9HB75 910 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 DDX43Q9NXZ2 648 aaKnown RBP21.46■■□□□ 1.03
NPHP4-206ENST00000468253 DACH1Q9UI36 760 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 CTNND2Q9UQB3 1225 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 NR2E1Q9Y466 385 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 VCANP13611 3396 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 CUL9Q8IWT3 2517 aa21.46■■□□□ 1.03
NPHP4-206ENST00000468253 VNN2O95498 520 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 HLA-DRAP01903 254 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 TRIM49P0CI25 452 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 TRIM49CP0CI26 452 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 GNL1P36915 607 aaPredicted RBP21.45■■□□□ 1.02
NPHP4-206ENST00000468253 MARSP56192 900 aaKnown RBP21.45■■□□□ 1.02
NPHP4-206ENST00000468253 ZNF699Q32M78 642 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 ZNF667Q5HYK9 610 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 LRRTM3Q86VH5 581 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 KBTBD7Q8WVZ9 684 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 SRRTQ9BXP5 876 aaKnown RBP21.45■■□□□ 1.02
NPHP4-206ENST00000468253 POMKQ9H5K3 350 aa21.45■■□□□ 1.02
NPHP4-206ENST00000468253 BDP1A6H8Y1 2624 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 WEE2P0C1S8 567 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 OR4Q2P0C623 313 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 STX17P56962 302 aa21.44■■□□□ 1.02
NPHP4-206ENST00000468253 DUSP4Q13115 394 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms