RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 RAD23BP54727 409 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 NNTQ13423 1086 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 CUL1Q13616 776 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 PIGHQ14442 188 aaPredicted RBP10.82□□□□□ -0.68
MSH5-213ENST00000468136 ZNF268Q14587 947 aaPredicted RBP10.82□□□□□ -0.68
MSH5-213ENST00000468136 MESDQ14696 234 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 SV2CQ496J9 727 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 SGO2Q562F6 1265 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 FAM26DQ5JW98 314 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 CCSAPQ6IQ19 270 aaPredicted RBP10.82□□□□□ -0.68
MSH5-213ENST00000468136 EMBQ6PCB8 327 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 CDR2LQ86X02 465 aaPredicted RBP10.82□□□□□ -0.68
MSH5-213ENST00000468136 C3orf20Q8ND61 904 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 RAET1EQ8TD07 263 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 PPP1R16BQ96T49 567 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 RHOXF2Q9BQY4 288 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 SENP6Q9GZR1 1112 aaPredicted RBP10.82□□□□□ -0.68
MSH5-213ENST00000468136 CYLDQ9NQC7 956 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 FEZ2Q9UHY8 353 aaPredicted RBP10.82□□□□□ -0.68
MSH5-213ENST00000468136 GIT1Q9Y2X7 761 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 NOC2LQ9Y3T9 749 aaKnown RBP10.82□□□□□ -0.68
MSH5-213ENST00000468136 CDY2AQ9Y6F7 541 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 UMODL1Q5DID0 1318 aa10.82□□□□□ -0.68
MSH5-213ENST00000468136 ANK1P16157 1881 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 CITO14578 2027 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 FAM187AA6NFU0 413 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 PIRO00625 290 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 ZNF623O75123 536 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 CSDE1O75534 798 aaKnown RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 ECM2O94769 699 aaPredicted RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 ASGR1P07306 291 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 CD19P15391 556 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 CD58P19256 250 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 RRM1P23921 792 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 CHRNA3P32297 505 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 GABRB2P47870 512 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 TAF6P49848 677 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 PEX5P50542 639 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 C2orf54Q08AI8 447 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 MAMLD1Q13495 774 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 DHX34Q14147 1143 aaKnown RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 LONRF2Q1L5Z9 754 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 BEND6Q5SZJ8 279 aaPredicted RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 UBXN11Q5T124 520 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 C9orf57Q5W0N0 161 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 TWF2Q6IBS0 349 aaKnown RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 DNAJC24Q6P3W2 148 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 LCLAT1Q6UWP7 414 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 CXCL17Q6UXB2 119 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 CCNI2Q6ZMN8 369 aaPredicted RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 FAM228AQ86W67 206 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 ZDHHC17Q8IUH5 632 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 RHOT1Q8IXI2 618 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 NIPA2Q8N8Q9 360 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 ARRDC4Q8NCT1 418 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 IPO4Q8TEX9 1081 aaKnown RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 STK32AQ8WU08 396 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 CPA5Q8WXQ8 436 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 RSPH1Q8WYR4 309 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 LENG1Q96BZ8 264 aaPredicted RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 PGBD4Q96DM1 585 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 RNPC3Q96LT9 517 aaKnown RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 ZIC5Q96T25 663 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 C11orf70Q9BRQ4 267 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 EIF2AQ9BY44 585 aaKnown RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 ARHGAP39Q9C0H5 1083 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 ACP6Q9NPH0 428 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 RBM12Q9NTZ6 932 aaKnown RBP10.81□□□□□ -0.68
MSH5-213ENST00000468136 RASAL2Q9UJF2 1139 aa10.81□□□□□ -0.68
MSH5-213ENST00000468136 SMIM28A0A1B0GU29 152 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 SIGLEC16A6NMB1 481 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 MEFVO15553 781 aaPredicted RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 FKTNO75072 461 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 PGK1P00558 417 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 BRD2P25440 801 aaKnown RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 RPL9P32969 192 aaKnown RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 SCNN1AP37088 669 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 FNTAP49354 379 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 EPHB4P54760 987 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 COPS2P61201 443 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 MGAT3Q09327 533 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 TMEM62Q0P6H9 643 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 PAK2Q13177 524 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 HIC1Q14526 733 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 KCNA10Q16322 511 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 FAM47CQ5HY64 1035 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 FBXO47Q5MNV8 452 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 ARHGAP17Q68EM7 881 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 GDF6Q6KF10 455 aaPredicted RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 DCUN1D2Q6PH85 259 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 SYDE1Q6ZW31 735 aaPredicted RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 MRPL10Q7Z7H8 261 aaKnown RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 TOP6BLQ8N6T0 577 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 SLC4A11Q8NBS3 891 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 C18orf8Q96DM3 657 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 RBM41Q96IZ5 413 aaKnown RBP10.8□□□□□ -0.68
MSH5-213ENST00000468136 TNIP3Q96KP6 325 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 GLT1D1Q96MS3 346 aa10.8□□□□□ -0.68
MSH5-213ENST00000468136 PNKPQ96T60 521 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms