RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 CENPAP49450 140 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 CDK9P50750 372 aaKnown RBP9.71□□□□□ -0.86
LCA5-203ENST00000467898 NR1H2P55055 460 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 VCPP55072 806 aaKnown RBP9.71□□□□□ -0.86
LCA5-203ENST00000467898 P2RX3P56373 397 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 HAND2P61296 217 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 AMPD3Q01432 767 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 MGAT5Q09328 741 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 SF3B4Q15427 424 aaKnown RBP eCLIP9.71□□□□□ -0.86
LCA5-203ENST00000467898 SPA17Q15506 151 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 STK11Q15831 433 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 ANKRD20A4Q4UJ75 823 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 PPP6R3Q5H9R7 873 aaPredicted RBP9.71□□□□□ -0.86
LCA5-203ENST00000467898 TRAPPC3LQ5T215 181 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 SLX4IPQ5VYV7 408 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 SNX32Q86XE0 403 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 KIAA1958Q8N8K9 716 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 OR6Y1Q8NGX8 325 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 AFG1LQ8WV93 481 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 CKAP2Q8WWK9 683 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 SEC14L1Q92503 715 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 METTL2AQ96IZ6 378 aaKnown RBP9.71□□□□□ -0.86
LCA5-203ENST00000467898 FAM20AQ96MK3 541 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 STRBPQ96SI9 672 aaKnown RBP9.71□□□□□ -0.86
LCA5-203ENST00000467898 CALN1Q9BXU9 219 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 KIAA1683Q9H0B3 1180 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 NDE1Q9NXR1 346 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 NARFQ9UHQ1 456 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 HAO1Q9UJM8 370 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 DENND2AQ9ULE3 1009 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 DNM3Q9UQ16 869 aa9.71□□□□□ -0.86
LCA5-203ENST00000467898 WDR19Q8NEZ3 1342 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 WTIPA6NIX2 430 aaPredicted RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 XPOTO43592 962 aaKnown RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 SULT1C4O75897 302 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 GAS8O95995 478 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 TARSP26639 723 aaKnown RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 PCSK6P29122 969 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 NUDT1P36639 197 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 BCAMP50895 628 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 AP2B1P63010 937 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 ERVK-9P63128 1117 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 KRT81Q14533 505 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 MOGQ16653 247 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 FAM182BQ5T319 152 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 PPP4R4Q6NUP7 873 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 ELMSAN1Q6PJG2 1045 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 UGT2A3Q6UWM9 527 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 DBX2Q6ZNG2 339 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 CYB5R4Q7L1T6 521 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 GPR141Q7Z602 305 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 TBC1D10CQ8IV04 446 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 NOSTRINQ8IVI9 506 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 TRMT44Q8IYL2 757 aaKnown RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 MED15Q96RN5 788 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 TXLNGYQ9BZA5 131 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 GPAMQ9HCL2 828 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 TNFRSF10DQ9UBN6 386 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 STARD13Q9Y3M8 1113 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 SPEF1Q9Y4P9 236 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 UBR3Q6ZT12 1888 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 ZNF701M0R085 212 aaPredicted RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 CLOCKO15516 846 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 RAD51CO43502 376 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 ONECUT3O60422 494 aaPredicted RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 IDH1O75874 414 aaKnown RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 GNL1P36915 607 aaPredicted RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 STK4Q13043 487 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 CCDC58Q4VC31 144 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 TIGD2Q4W5G0 525 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 DCP2Q8IU60 420 aaKnown RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 RELL1Q8IUW5 271 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 SNX29Q8TEQ0 813 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 HERVK_113Q902F9 699 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 KRT12Q99456 494 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 MTFR1LQ9H019 292 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 CUEDC2Q9H467 287 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 SMARCAD1Q9H4L7 1026 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 ZNF696Q9H7X3 374 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 NEK6Q9HC98 313 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 IGSF9Q9P2J2 1179 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 SRP68Q9UHB9 627 aaKnown RBP9.7□□□□□ -0.86
LCA5-203ENST00000467898 TACC3Q9Y6A5 838 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 MAD1L1Q9Y6D9 718 aa9.7□□□□□ -0.86
LCA5-203ENST00000467898 OLFM2O95897 454 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 ALOX5P09917 674 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 PKLRP30613 574 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 HSPA1LP34931 641 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 ENTPD1P49961 510 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 OLR1P78380 273 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 CETN1Q12798 172 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 PSMD6Q15008 389 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 ALX1Q15699 326 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 ZNF658Q5TYW1 1059 aaPredicted RBP9.69□□□□□ -0.86
LCA5-203ENST00000467898 MFSD5Q6N075 450 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 WDR59Q6PJI9 974 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 SHC4Q6S5L8 630 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 ADAMTSL2Q86TH1 951 aa9.69□□□□□ -0.86
LCA5-203ENST00000467898 VPS52Q8N1B4 723 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms