RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 CYP26A1O43174 497 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 TBC1D4O60343 1298 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 TADA2AO75478 443 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 OAZ2O95190 189 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 CALCAP01258 141 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 CYP11A1P05108 521 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 PNMA6AP0CW24 399 aaPredicted RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 SKILP12757 684 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 CHRNB2P17787 502 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 TRIM21P19474 475 aaKnown RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 SOX5P35711 763 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 GNL1P36915 607 aaPredicted RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 PNPLA4P41247 253 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 PRKCIP41743 596 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 STAT1P42224 750 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 PIK3CAP42336 1068 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 BRCC3P46736 316 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 OR1G1P47890 313 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 TAF6P49848 677 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 ZNF132P52740 706 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 RAD23BP54727 409 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 NOP14P78316 857 aaKnown RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 CDK17Q00537 523 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 RNASELQ05823 741 aaKnown RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 CCDC173Q0VFZ6 552 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 MYO1EQ12965 1108 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 MEA1Q16626 185 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 ASTE1Q2TB18 679 aaPredicted RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 ZNF699Q32M78 642 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 PAN2Q504Q3 1202 aaKnown RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 KIAA0319Q5VV43 1072 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 WSCD1Q658N2 575 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 FAM109BQ6ICB4 259 aaPredicted RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 PDXDC1Q6P996 788 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 PSRC1Q6PGN9 363 aaPredicted RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 KCNT2Q6UVM3 1135 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 ENOSF1Q7L5Y1 443 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 TMEM139Q8IV31 216 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 CMTR2Q8IYT2 770 aaKnown RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 ABI1Q8IZP0 508 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 PDCL2Q8N4E4 241 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 WDTC1Q8N5D0 677 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 ZNF397Q8NF99 534 aaPredicted RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 SLC30A5Q8TAD4 765 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 OLIG1Q8TAK6 271 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 BCL7CQ8WUZ0 217 aaPredicted RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 KBTBD7Q8WVZ9 684 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 DDX1Q92499 740 aaKnown RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 ANP32BQ92688 251 aaKnown RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 CLP1Q92989 425 aaKnown RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 SUSD3Q96L08 255 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 FAM81BQ96LP2 452 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 RPS6KC1Q96S38 1066 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 MMS19Q96T76 1030 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 LPIN3Q9BQK8 851 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 RTP3Q9BQQ7 232 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 ZSWIM1Q9BR11 485 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 ELOVL4Q9GZR5 314 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 NIF3L1Q9GZT8 377 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 PRO3102Q9H379 93 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 ACP6Q9NPH0 428 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 CHST7Q9NS84 486 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 CISHQ9NSE2 258 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 MARCH5Q9NX47 278 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 ARHGAP20Q9P2F6 1191 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 L1RE1Q9UN81 338 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 INSL6Q9Y581 213 aa6.37□□□□□ -1.39
USP39-213ENST00000467885 TIMM13Q9Y5L4 95 aaPredicted RBP6.37□□□□□ -1.39
USP39-213ENST00000467885 SIP14410 1827 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 LCHNA4D1U4 455 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 ZBBXA8MT70 800 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 F8VZ95 297 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 LILRB3O75022 631 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 MFAP3LO75121 409 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 RNF40O75150 1001 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 ATP2C2O75185 946 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 CILPO75339 1184 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 GFPT2O94808 682 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 ARHGEF15O94989 841 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 KIF4AO95239 1232 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 CFHP08603 1231 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 PDGFRBP09619 1106 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 MYOGP15173 224 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 ATP2A2P16615 1042 aaKnown RBP6.36□□□□□ -1.39
USP39-213ENST00000467885 FGFR3P22607 806 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 RFX1P22670 979 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 WARSP23381 471 aaKnown RBP6.36□□□□□ -1.39
USP39-213ENST00000467885 TBXAS1P24557 533 aaPredicted RBP6.36□□□□□ -1.39
USP39-213ENST00000467885 BMPR1AP36894 532 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 PBX3P40426 434 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 RAP1GAPP47736 663 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 KCNJ6P48051 423 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 ALDH7A1P49419 539 aaKnown RBP6.36□□□□□ -1.39
USP39-213ENST00000467885 NDST1P52848 882 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 RABGGTBP53611 331 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 GSDMDP57764 484 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 PTK2Q05397 1052 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 INCA1Q0VD86 236 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 RAPGEF1Q13905 1077 aa6.36□□□□□ -1.39
USP39-213ENST00000467885 TRIM14Q14142 442 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms