RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 WDR27A2RRH5 827 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 VWC2LB2RUY7 222 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 NR2F6P10588 404 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 CDKN1CP49918 316 aaPredicted RBP6.13□□□□□ -1.43
ATG3-204ENST00000467275 ZNF135P52742 658 aaPredicted RBP6.13□□□□□ -1.43
ATG3-204ENST00000467275 DSC2Q02487 901 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 PAPD7Q5XG87 772 aaKnown RBP6.13□□□□□ -1.43
ATG3-204ENST00000467275 GLCCI1Q86VQ1 547 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 MIER2Q8N344 545 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 SMG7Q92540 1137 aaKnown RBP6.13□□□□□ -1.43
ATG3-204ENST00000467275 NAF1Q96HR8 494 aaKnown RBP6.13□□□□□ -1.43
ATG3-204ENST00000467275 PBKQ96KB5 322 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 CNPPD1Q9BV87 410 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 ALG8Q9BVK2 526 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 RNF7Q9UBF6 113 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 POLHQ9Y253 713 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.13□□□□□ -1.43
ATG3-204ENST00000467275 ADGRA2Q96PE1 1338 aa6.13□□□□□ -1.43
ATG3-204ENST00000467275 NT5C1B-RDH14C9J2C7 533 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 CHEK2O96017 543 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 RHOP08100 348 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 LPOP22079 712 aaPredicted RBP6.12□□□□□ -1.43
ATG3-204ENST00000467275 HABP2Q14520 560 aaPredicted RBP6.12□□□□□ -1.43
ATG3-204ENST00000467275 EPHA10Q5JZY3 1008 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 KIAA1614Q5VZ46 1190 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 FCRLBQ6BAA4 426 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 CAMKK1Q8N5S9 505 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 C3orf20Q8ND61 904 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 PSD4Q8NDX1 1056 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 DDB2Q92466 427 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 ANKS1AQ92625 1134 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 ACTRT3Q9BYD9 372 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 SIK2Q9H0K1 926 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 PADI4Q9UM07 663 aa6.12□□□□□ -1.43
ATG3-204ENST00000467275 LRRC14BA6NHZ5 514 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 CGB1A6NKQ9 187 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 VPS4BO75351 444 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 SOAT2O75908 522 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 ARIH2O95376 493 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 PRKCGP05129 697 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 ITGALP20701 1170 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 ITPKBP27987 946 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 PHKA1P46020 1223 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 PIK3CGP48736 1102 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 ODF1Q14990 250 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 PLAC9Q5JTB6 97 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 TAF2Q6P1X5 1199 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 FKBP10Q96AY3 582 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 OSBPL9Q96SU4 736 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 SMOC2Q9H3U7 446 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 ETAA1Q9NY74 926 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 EHD3Q9NZN3 535 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 ADAM21Q9UKJ8 722 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 PCDHA3Q9Y5H8 950 aa6.11□□□□□ -1.43
ATG3-204ENST00000467275 SBNO2Q9Y2G9 1366 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 ALG1L2C9J202 215 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 FTH1P19P0C7X4 201 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 EBLN1P0CF75 366 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 RARBP10826 455 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 ZFXP17010 805 aaPredicted RBP6.1□□□□□ -1.43
ATG3-204ENST00000467275 CHRM3P20309 590 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 PRDX5P30044 214 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 CCT8P50990 548 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 KRTAP10-11P60412 298 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 RBM20Q5T481 1227 aaKnown RBP6.1□□□□□ -1.43
ATG3-204ENST00000467275 THEMIS2Q5TEJ8 643 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 PRPF38AQ8NAV1 312 aaKnown RBP6.1□□□□□ -1.43
ATG3-204ENST00000467275 DPF1Q92782 380 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 C1orf43Q9BWL3 253 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 SLC13A1Q9BZW2 595 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 AMBRA1Q9C0C7 1298 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 GPR35Q9HC97 309 aa6.1□□□□□ -1.43
ATG3-204ENST00000467275 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.1□□□□□ -1.43
ATG3-204ENST00000467275 COL3A1P02461 1466 aaPredicted RBP6.09□□□□□ -1.43
ATG3-204ENST00000467275 TNKSO95271 1327 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 AOX1Q06278 1338 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 WIPF3A6NGB9 483 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 KIF20AO95235 890 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 ZNF81P51508 661 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 EVA1CP58658 441 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 TBCCQ15814 346 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 SRSF7Q16629 238 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATG3-204ENST00000467275 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 TNPO1Q92973 898 aaKnown RBP6.09□□□□□ -1.43
ATG3-204ENST00000467275 RFKQ969G6 155 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 MRPS18AQ9NVS2 196 aaKnown RBP6.09□□□□□ -1.43
ATG3-204ENST00000467275 RAD54BQ9Y620 910 aa6.09□□□□□ -1.43
ATG3-204ENST00000467275 PRSS29PA6NIE9 313 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 DTNBO60941 627 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 GNAI2P04899 355 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 CD6P30203 668 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 FXR1P51114 621 aaKnown RBP eCLIP6.08□□□□□ -1.44
ATG3-204ENST00000467275 AMPD3Q01432 767 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 BMPR2Q13873 1038 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 KIF22Q14807 665 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 FAM136AQ96C01 138 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 SMAD5Q99717 465 aaKnown RBP6.08□□□□□ -1.44
ATG3-204ENST00000467275 TINAGL1Q9GZM7 467 aaPredicted RBP6.08□□□□□ -1.44
ATG3-204ENST00000467275 WDCPQ9H6R7 721 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 DKK3Q9UBP4 350 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms