RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MRPL58Q14197 206 aaKnown RBP11.92□□□□□ -0.5
VCP-204ENST00000466100 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 LRIT3Q3SXY7 679 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 RTP2Q5QGT7 225 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 PRPF38BQ5VTL8 546 aaKnown RBP11.92□□□□□ -0.5
VCP-204ENST00000466100 E4F1Q66K89 784 aaPredicted RBP11.92□□□□□ -0.5
VCP-204ENST00000466100 DDX53Q86TM3 631 aaKnown RBP11.92□□□□□ -0.5
VCP-204ENST00000466100 ADGRF2Q8IZF7 708 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 TMEM86AQ8N2M4 240 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 APPL2Q8NEU8 664 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 IQCDQ96DY2 449 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 PDLIM2Q96JY6 352 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 TGS1Q96RS0 853 aaKnown RBP11.92□□□□□ -0.5
VCP-204ENST00000466100 MMS19Q96T76 1030 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 NUP58Q9BVL2 599 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 STK33Q9BYT3 514 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 NLRC4Q9NPP4 1024 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 CHST7Q9NS84 486 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 CISHQ9NSE2 258 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 MSRAQ9UJ68 235 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 MYO6Q9UM54 1294 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 CAPN11Q9UMQ6 739 aa11.92□□□□□ -0.5
VCP-204ENST00000466100 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.5
VCP-204ENST00000466100 TIMM13Q9Y5L4 95 aaPredicted RBP11.92□□□□□ -0.5
VCP-204ENST00000466100 MTCL1Q9Y4B5 1905 aaKnown RBP11.92□□□□□ -0.5
VCP-204ENST00000466100 ARHGEF37A1IGU5 675 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 FOXN3O00409 490 aaPredicted RBP11.91□□□□□ -0.5
VCP-204ENST00000466100 HCRTO43612 131 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 TBC1D4O60343 1298 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 MFAP3LO75121 409 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 OAZ2O95190 189 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 RB1P06400 928 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 PNMA6AP0CW24 399 aaPredicted RBP11.91□□□□□ -0.5
VCP-204ENST00000466100 CASP14P31944 242 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 DRAP1Q14919 205 aaPredicted RBP11.91□□□□□ -0.5
VCP-204ENST00000466100 ARHGAP44Q17R89 818 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 FAM171A1Q5VUB5 890 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 PDXDC1Q6P996 788 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 FAM71AQ8IYT1 594 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 B3GALT6Q96L58 329 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 TWNKQ96RR1 684 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 ELOVL4Q9GZR5 314 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 ZBP1Q9H171 429 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 DSEQ9UL01 958 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 BARX2Q9UMQ3 279 aaPredicted RBP11.91□□□□□ -0.5
VCP-204ENST00000466100 LZTS1Q9Y250 596 aa11.91□□□□□ -0.5
VCP-204ENST00000466100 LRRC53A6NM62 1247 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 CLSTN1O94985 981 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 CD58P19256 250 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 DNAJB1P25685 340 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 LMO2P25791 158 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 NDST1P52848 882 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 RAD23BP54727 409 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 YWHAEP62258 255 aaKnown RBP11.9□□□□□ -0.5
VCP-204ENST00000466100 ZBED6P86452 979 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 DSG1Q02413 1049 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 USP41Q3LFD5 358 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 VARS2Q5ST30 1063 aaKnown RBP11.9□□□□□ -0.5
VCP-204ENST00000466100 KIAA0319Q5VV43 1072 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 OVOS1Q6IE37 1185 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 UNC93AQ86WB7 457 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 GPR65Q8IYL9 337 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 TTC39CQ8N584 583 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 TC2NQ8N9U0 490 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 SLC4A11Q8NBS3 891 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 OR10T2Q8NGX3 314 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 SPPL3Q8TCT6 385 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 PIK3R5Q8WYR1 880 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 TIFAQ96CG3 184 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 DNAJC7Q99615 494 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 PKMYT1Q99640 499 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 TTPALQ9BTX7 342 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 C11orf84Q9BUA3 381 aaPredicted RBP11.9□□□□□ -0.5
VCP-204ENST00000466100 STK39Q9UEW8 545 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 MTUS1Q9ULD2 1270 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 STXBP5LQ9Y2K9 1186 aa11.9□□□□□ -0.5
VCP-204ENST00000466100 PRUNE2Q8WUY3 3088 aa11.9□□□□□ -0.51
VCP-204ENST00000466100 EPOPA6NHQ4 379 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 H3BNC9 293 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 FSCN2O14926 492 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 GRM6O15303 877 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 LILRB3O75022 631 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 HNRNPH3P31942 346 aaKnown RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 CLCN1P35523 988 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 SOX5P35711 763 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 GNL1P36915 607 aaPredicted RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 LHX1P48742 406 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 GLUD2P49448 558 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 YWHAHQ04917 246 aaPredicted RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 UBE3AQ05086 875 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 GOLGA8FQ08AF8 430 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 GOLGA8DPQ0D2H9 430 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 CAMK1Q14012 370 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 CCDC142Q17RM4 750 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 TMEM270Q6UE05 265 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 RSPO2Q6UXX9 243 aaPredicted RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 CACNA2D4Q7Z3S7 1137 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms