RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SHTN1A0MZ66 631 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 GNAI3P08754 354 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 LPOP22079 712 aaPredicted RBP6.71□□□□□ -1.34
SMC4-205ENST00000465563 SMARCA1P28370 1054 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 NDUFV1P49821 464 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 PSMC1P62191 440 aaKnown RBP6.71□□□□□ -1.34
SMC4-205ENST00000465563 GNAI1P63096 354 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 SNAPC2Q13487 334 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 SRSF7Q16629 238 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMC4-205ENST00000465563 ZNF778Q96MU6 729 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 OSBPL9Q96SU4 736 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 CFAP97Q9P2B7 532 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 PADI4Q9UM07 663 aa6.71□□□□□ -1.34
SMC4-205ENST00000465563 SETD1BQ9UPS6 1966 aaKnown RBP6.71□□□□□ -1.34
SMC4-205ENST00000465563 WDR91A4D1P6 747 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 ZNF785A8K8V0 405 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 CHEK2O96017 543 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 GJB1P08034 283 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 RHOP08100 348 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 NR2F6P10588 404 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 ITKQ08881 620 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 PCBP2Q15366 365 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMC4-205ENST00000465563 EZH2Q15910 746 aaKnown RBP6.7□□□□□ -1.34
SMC4-205ENST00000465563 UAP1L1Q3KQV9 507 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 SLC4A10Q6U841 1118 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 CAMKK1Q8N5S9 505 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 RFKQ969G6 155 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 FKBP10Q96AY3 582 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 EHD3Q9NZN3 535 aa6.7□□□□□ -1.34
SMC4-205ENST00000465563 ZNF70Q9UC06 446 aaPredicted RBP6.7□□□□□ -1.34
SMC4-205ENST00000465563 NT5C1B-RDH14C9J2C7 533 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 FZD9O00144 591 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 SOAT2O75908 522 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 GUCY2FP51841 1108 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 DSC2Q02487 901 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 SLC10A2Q12908 348 aaPredicted RBP6.69□□□□□ -1.34
SMC4-205ENST00000465563 MTMR1Q13613 665 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 HABP2Q14520 560 aaPredicted RBP6.69□□□□□ -1.34
SMC4-205ENST00000465563 LLGL1Q15334 1064 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 PLAC9Q5JTB6 97 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 EFCAB2Q5VUJ9 269 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 SUMO4Q6EEV6 95 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 PNMA8AQ86V59 439 aaPredicted RBP6.69□□□□□ -1.34
SMC4-205ENST00000465563 PSD4Q8NDX1 1056 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 SEMA6DQ8NFY4 1073 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 CNPPD1Q9BV87 410 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 ACTRT3Q9BYD9 372 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 AMBRA1Q9C0C7 1298 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 ETAA1Q9NY74 926 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 FLRT1Q9NZU1 646 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 SERPINB13Q9UIV8 391 aa6.69□□□□□ -1.34
SMC4-205ENST00000465563 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.69□□□□□ -1.34
SMC4-205ENST00000465563 LINC01548A6NM66 108 aa6.68□□□□□ -1.34
SMC4-205ENST00000465563 ZFXP17010 805 aaPredicted RBP6.68□□□□□ -1.34
SMC4-205ENST00000465563 CCT8P50990 548 aa6.68□□□□□ -1.34
SMC4-205ENST00000465563 ZNF135P52742 658 aaPredicted RBP6.68□□□□□ -1.34
SMC4-205ENST00000465563 ADKP55263 362 aaKnown RBP6.68□□□□□ -1.34
SMC4-205ENST00000465563 GRM1Q13255 1194 aa6.68□□□□□ -1.34
SMC4-205ENST00000465563 TAF2Q6P1X5 1199 aa6.68□□□□□ -1.34
SMC4-205ENST00000465563 SIK2Q9H0K1 926 aa6.68□□□□□ -1.34
SMC4-205ENST00000465563 CCDC8Q9H0W5 538 aaPredicted RBP6.68□□□□□ -1.34
SMC4-205ENST00000465563 SMOC2Q9H3U7 446 aa6.68□□□□□ -1.34
SMC4-205ENST00000465563 GPR35Q9HC97 309 aa6.68□□□□□ -1.34
SMC4-205ENST00000465563 KAT6AQ92794 2004 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 GABRDO14764 452 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 HNRNPCP07910 306 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMC4-205ENST00000465563 EBLN1P0CF75 366 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 ITGALP20701 1170 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 DRD4P21917 467 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 BMPR2Q13873 1038 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 C3orf20Q8ND61 904 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 MTMR8Q96EF0 704 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 SLAMF7Q9NQ25 335 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 POLHQ9Y253 713 aa6.67□□□□□ -1.34
SMC4-205ENST00000465563 FTH1P19P0C7X4 201 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 RARBP10826 455 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 ITGB6P18564 788 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 PIK3CGP48736 1102 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 TFF2Q03403 129 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 TBCCQ15814 346 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 RBM20Q5T481 1227 aaKnown RBP6.66□□□□□ -1.34
SMC4-205ENST00000465563 ZNF425Q6IV72 752 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 ZNF551Q7Z340 670 aaPredicted RBP6.66□□□□□ -1.34
SMC4-205ENST00000465563 SERTAD4Q9NUC0 356 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 DKK3Q9UBP4 350 aa6.66□□□□□ -1.34
SMC4-205ENST00000465563 PRSS29PA6NIE9 313 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 TARM1B6A8C7 271 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 ARIH2O95376 493 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 CDK11BP21127 795 aaKnown RBP6.65□□□□□ -1.34
SMC4-205ENST00000465563 CD6P30203 668 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 FXR1P51114 621 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMC4-205ENST00000465563 KIF22Q14807 665 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 TMEM119Q4V9L6 283 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 VGLL2Q8N8G2 317 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 FAM136AQ96C01 138 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 MRPS18AQ9NVS2 196 aaKnown RBP6.65□□□□□ -1.34
SMC4-205ENST00000465563 RAD54BQ9Y620 910 aa6.65□□□□□ -1.34
SMC4-205ENST00000465563 LRRC14BA6NHZ5 514 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 VPS4BO75351 444 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 KATNA1O75449 491 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms