RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 SRRM1Q8IYB3 904 aaKnown RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ADGRF4Q8IZF3 695 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ZNF295-AS1Q8N0V1 137 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 SPICE1Q8N0Z3 855 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 TMEM151AQ8N4L1 468 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 GLIS3Q8NEA6 775 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 GDAP1Q8TB36 358 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ADAMTS19Q8TE59 1207 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 PRCCQ92733 491 aaPredicted RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 CD101Q93033 1021 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 COA7Q96BR5 231 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 PPP1R14BQ96C90 147 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ZNF653Q96CK0 615 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 NSL1Q96IY1 281 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ZNF333Q96JL9 665 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 GORASP1Q9BQQ3 440 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 SIKE1Q9BRV8 207 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 DDX23Q9BUQ8 820 aaKnown RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 WDR11Q9BZH6 1224 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 VPS11Q9H270 941 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 TRABDQ9H4I3 376 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 JMJD4Q9H9V9 463 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 MRPL47Q9HD33 250 aaKnown RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 ERVK-5Q9HDB9 667 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 NINJ2Q9NZG7 142 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 TMOD4Q9NZQ9 345 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 PSMC3IPQ9P2W1 217 aaPredicted RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 STX18Q9P2W9 335 aaKnown RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 TMCO1Q9UM00 188 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 EXOC7Q9UPT5 735 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 NAALADL1Q9UQQ1 740 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 THRAP3Q9Y2W1 955 aaKnown RBP7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 COMMD3-BMI1R4GMX3 469 aa7.6□□□□□ -1.19
CLSTN1-204ENST00000464286 COL24A1Q17RW2 1714 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 LOC102724428A0A0B4J2F2 783 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SMIM22K7EJ46 135 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 MAGEC1O60732 1142 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ZC3H11AO75152 810 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 FKBP6O75344 327 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SKAP2O75563 359 aaPredicted RBP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 GDF11O95390 407 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 PENKP01210 267 aaPredicted RBP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 CYP3A4P08684 503 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 KCNA3P22001 575 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 CA4P22748 312 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ATP2B4P23634 1241 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 MAPK4P31152 587 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ZNF76P36508 570 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SREBF1P36956 1147 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 MAGEA4P43358 317 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SIK1P57059 783 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 AP2B1P63010 937 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 MOGSQ13724 837 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 MORF4L2Q15014 288 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ECM1Q16610 540 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 KYNUQ16719 465 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ARHGAP44Q17R89 818 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 TRMT5Q32P41 509 aaKnown RBP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 HSP90AA5PQ58FG0 334 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 MAP3K21Q5TCX8 1036 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 TTC27Q6P3X3 843 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 DRICH1Q6PGQ1 229 aaPredicted RBP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 C4orf50Q6ZRC1 276 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 OTUD6AQ7L8S5 288 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 NLRP9Q7RTR0 991 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 LCA5Q86VQ0 697 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 RHOT1Q8IXI2 618 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 PGBD3Q8N328 593 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 FAM81AQ8TBF8 368 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ETNPPLQ8TBG4 499 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 CCDC110Q8TBZ0 833 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 PARD3BQ8TEW8 1205 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 GJA10Q969M2 543 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ARHGEF26Q96DR7 871 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 RBM41Q96IZ5 413 aaKnown RBP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 RMDN2Q96LZ7 410 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ACCSQ96QU6 501 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SETDB2Q96T68 719 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ZNF184Q99676 751 aaPredicted RBP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 NUP85Q9BW27 656 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 AMNQ9BXJ7 453 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 RTFDC1Q9BY42 306 aaPredicted RBP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 OSBPL8Q9BZF1 889 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 CRISPLD1Q9H336 500 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 FAM96AQ9H5X1 160 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 UBE2TQ9NPD8 197 aaPredicted RBP7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 ENAMQ9NRM1 1142 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 AGPAT3Q9NRZ7 376 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 DLGAP2Q9P1A6 1054 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 THEGQ9P2T0 379 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 CIDEBQ9UHD4 219 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 KCNG1Q9UIX4 513 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SYNPO2Q9UMS6 1093 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 POLIQ9UNA4 740 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 COG5Q9UP83 839 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SORCS3Q9UPU3 1222 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 SHOC2Q9UQ13 582 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 PTPN22Q9Y2R2 807 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 C2CD2Q9Y426 696 aa7.59□□□□□ -1.19
CLSTN1-204ENST00000464286 NR2E1Q9Y466 385 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms