RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 GCLMP48507 274 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 MFAP3P55082 362 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 HNRNPH2P55795 449 aaKnown RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 TAP1Q03518 808 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 DSC3Q14574 896 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 SNRNP35Q16560 246 aaKnown RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ARHGAP44Q17R89 818 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 FAM102BQ5T8I3 360 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 FAM117BQ6P1L5 589 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ENOSF1Q7L5Y1 443 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ARHGEF19Q8IW93 802 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 EFCAB13Q8IY85 973 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 RDH13Q8NBN7 331 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 TSEN2Q8NCE0 465 aaKnown RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 CCDC26Q8TAB7 109 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 SP7Q8TDD2 431 aaPredicted RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 SCLT1Q96NL6 688 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 GUCD1Q96NT3 240 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 RPS6KC1Q96S38 1066 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 RUFY1Q96T51 708 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ADAM2Q99965 735 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 KIAA1586Q9HCI6 787 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 CHST12Q9NRB3 414 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 GOLGA6AQ9NYA3 693 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 NOCTQ9UK39 431 aaKnown RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 NFU1Q9UMS0 254 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 DENND3A2RUS2 1198 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 TISP43B9A030 160 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 C9IYK1 514 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 KRIT1O00522 736 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 SART1O43290 800 aaKnown RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 PHACTR2O75167 634 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 CSDE1O75534 798 aaKnown RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 STAG3L1P0CL83 205 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 SRGAP2CP0DJJ0 459 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 GPC5P78333 572 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 SKOR1P84550 965 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 POU5F1Q01860 360 aaKnown RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 PCBP1Q15365 356 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 SPDYCQ5MJ68 293 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 LRIG3Q6UXM1 1119 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 MAEAQ7L5Y9 396 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 NPAS4Q8IUM7 802 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 EPS8L1Q8TE68 723 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 LRRC45Q96CN5 670 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ZNF689Q96CS4 500 aaPredicted RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ARHGEF26Q96DR7 871 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 NLRP4Q96MN2 994 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 GDAP1L1Q96MZ0 367 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ZIM3Q96PE6 472 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 TRAIPQ9BWF2 469 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 NFKBIZQ9BYH8 718 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 ELAC1Q9H777 363 aaKnown RBP10.57□□□□□ -0.72
PTPRD-207ENST00000463477 OSGEPQ9NPF4 335 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 GPRC5CQ9NQ84 441 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 KMT5AQ9NQR1 393 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 FAM114A2Q9NRY5 505 aa10.57□□□□□ -0.72
PTPRD-207ENST00000463477 CHD7Q9P2D1 2997 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 LCHNA4D1U4 455 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 LINC01553A4QN01 128 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 ANKRD63C9JTQ0 380 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 DGKIO75912 1065 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 ARHGEF15O94989 841 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 ECHS1P30084 290 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 DNA2P51530 1060 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 PTENP60484 403 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 CLDN10P78369 228 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 C1QBPQ07021 282 aaKnown RBP10.56□□□□□ -0.72
PTPRD-207ENST00000463477 CYP24A1Q07973 514 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 TFDP1Q14186 410 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 CFAP58Q5T655 872 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 KLHL7Q8IXQ5 586 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 RNF149Q8NC42 400 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 FBXL13Q8NEE6 735 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 KREMEN1Q96MU8 473 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 YME1L1Q96TA2 773 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 THAP2Q9H0W7 228 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 GOLPH3Q9H4A6 298 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
PTPRD-207ENST00000463477 ARHGAP28Q9P2N2 729 aa10.56□□□□□ -0.72
PTPRD-207ENST00000463477 GOLGA6L10A0A0M3HER8 536 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 A0A0U1RQF3 1178 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 FAM187AA6NFU0 413 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 ZSCAN5CA6NGD5 496 aaPredicted RBP10.55□□□□□ -0.72
PTPRD-207ENST00000463477 CCDC169A6NNP5 214 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 LRRN2O75325 713 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 PIGRP01833 764 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 FTLP02792 175 aaPredicted RBP10.55□□□□□ -0.72
PTPRD-207ENST00000463477 FAM153BP0C7A2 387 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 CHRNB2P17787 502 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 FGFR4P22455 802 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 GLRA2P23416 452 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 DRG2P55039 364 aaKnown RBP10.55□□□□□ -0.72
PTPRD-207ENST00000463477 ERVK-21P61565 698 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 GCNT1Q02742 428 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 MTMR3Q13615 1198 aa10.55□□□□□ -0.72
PTPRD-207ENST00000463477 DHX34Q14147 1143 aaKnown RBP10.55□□□□□ -0.72
PTPRD-207ENST00000463477 FAM153CQ494X1 144 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms