RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SLC28A3Q9HAS3 691 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 ALG13Q9NP73 1137 aaKnown RBP14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 CISHQ9NSE2 258 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 CEP72Q9P209 647 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 LAMA3Q16787 3333 aa14.85□□□□□ -0.03
PHACTR4-203ENST00000463428 A0A1W2PQJ5 194 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 ARHGEF37A1IGU5 675 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 H3BNC9 293 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 TBC1D4O60343 1298 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 LILRB3O75022 631 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 CILPO75339 1184 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 UBE3AQ05086 875 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 CAMK1Q14012 370 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 DRAP1Q14919 205 aaPredicted RBP14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 ARHGAP44Q17R89 818 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 USP41Q3LFD5 358 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 VARS2Q5ST30 1063 aaKnown RBP14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 TMC6Q7Z403 805 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 ADGRF2Q8IZF7 708 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 LNX1Q8TBB1 728 aaPredicted RBP14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 TTPALQ9BTX7 342 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 NLRC4Q9NPP4 1024 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 STK39Q9UEW8 545 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 DSEQ9UL01 958 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 MTUS1Q9ULD2 1270 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 BARX2Q9UMQ3 279 aaPredicted RBP14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.84□□□□□ -0.035e-7■■■□□ 18.7
PHACTR4-203ENST00000463428 MYO7AQ13402 2215 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 CHD9Q3L8U1 2897 aa14.84□□□□□ -0.03
PHACTR4-203ENST00000463428 EPOPA6NHQ4 379 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 FOXN3O00409 490 aaPredicted RBP14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 GRM6O15303 877 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 HCRTO43612 131 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 CLSTN1O94985 981 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 TRIM21P19474 475 aaKnown RBP14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 LMO2P25791 158 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 LHX1P48742 406 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 FXR1P51114 621 aaKnown RBP eCLIP14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 NDST1P52848 882 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 ERVFC1P60507 584 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 DSG1Q02413 1049 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 OVOS1Q6IE37 1185 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 UNC93AQ86WB7 457 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 CEP57Q86XR8 500 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 GPR65Q8IYL9 337 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 VPS52Q8N1B4 723 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 FBXO22Q8NEZ5 403 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 POF1BQ8WVV4 589 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 PIK3R5Q8WYR1 880 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 IQCDQ96DY2 449 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 TWNKQ96RR1 684 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 C11orf84Q9BUA3 381 aaPredicted RBP14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 ZBP1Q9H171 429 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 CERS4Q9HA82 394 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 HMGXB4Q9UGU5 601 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 CAPN11Q9UMQ6 739 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 STXBP5LQ9Y2K9 1186 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 ATG2AQ2TAZ0 1938 aa14.83□□□□□ -0.03
PHACTR4-203ENST00000463428 PNMA6AP0CW24 399 aaPredicted RBP14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 CTSAP10619 480 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 CD58P19256 250 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 GNL1P36915 607 aaPredicted RBP14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 GLUD2P49448 558 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 ZNF132P52740 706 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 RAD23BP54727 409 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 YWHAHQ04917 246 aaPredicted RBP14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 GPM6BQ13491 265 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 RAPGEF1Q13905 1077 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 METTL23Q86XA0 190 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 FAM71AQ8IYT1 594 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 TTC39CQ8N584 583 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 OR6B3Q8NGW1 331 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 ELOVL4Q9GZR5 314 aa14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 DDX43Q9NXZ2 648 aaKnown RBP14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 PUF60Q9UHX1 559 aaKnown RBP14.83□□□□□ -0.04
PHACTR4-203ENST00000463428 A8MXQ7 604 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 F8VZ95 297 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 SOX1O00570 391 aaPredicted RBP14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 FSCN2O14926 492 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 CASP14P31944 242 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 YWHAEP62258 255 aaKnown RBP14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 TRIM14Q14142 442 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 ARID5BQ14865 1188 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 PRSS55Q6UWB4 352 aaPredicted RBP14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 RSPO2Q6UXX9 243 aaPredicted RBP14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 ANKS3Q6ZW76 656 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 CACNA2D4Q7Z3S7 1137 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 CRYBG2Q8N1P7 616 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 SLC4A11Q8NBS3 891 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 OR10T2Q8NGX3 314 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 CPLX3Q8WVH0 158 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 ARNTL2Q8WYA1 636 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 RIN2Q8WYP3 895 aaPredicted RBP14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 PKMYT1Q99640 499 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 ACBD6Q9BR61 282 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 SNX25Q9H3E2 840 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 RXFP1Q9HBX9 757 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 MTRRQ9UBK8 725 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 MYO6Q9UM54 1294 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms