RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ZCWPW1Q9H0M4 648 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 PCIF1Q9H4Z3 704 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 TRPV4Q9HBA0 871 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 RBAKQ9NYW8 714 aaPredicted RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 PCDHA7Q9UN72 937 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 AGAP1Q9UPQ3 857 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 SLC27A5Q9Y2P5 690 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 R3HCC1Q9Y3T6 440 aaKnown RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 CFAP54Q96N23 3096 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 MYO15AQ9UKN7 3530 aa7.86□□□□□ -1.15
PTPRF-210ENST00000463041 EP300Q09472 2414 aaPredicted RBP7.86□□□□□ -1.15
PTPRF-210ENST00000463041 DMDP11532 3685 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 PVALEFA0A1B0GWK0 134 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 KANSL1LA0AUZ9 987 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 MTMR11A4FU01 709 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 GOLGA8IPA6NC78 632 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 GOLGA8JA6NMD2 632 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 NCAM2O15394 837 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 HUS1O60921 280 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 GLULP15104 373 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 PSMC3P17980 439 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 NBL1P41271 181 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 MAGEA9P43362 315 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 ME1P48163 572 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 ASIC1P78348 528 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 SNW1Q13573 536 aaKnown RBP7.85□□□□□ -1.15
PTPRF-210ENST00000463041 MLF2Q15773 248 aaPredicted RBP7.85□□□□□ -1.15
PTPRF-210ENST00000463041 DUOXA2Q1HG44 320 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 SLC39A12Q504Y0 691 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 FAM78AQ5JUQ0 283 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 RESP18Q5W5W9 173 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 WSCD1Q658N2 575 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 UNC13DQ70J99 1090 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 EPM2AIP1Q7L775 607 aaPredicted RBP7.85□□□□□ -1.15
PTPRF-210ENST00000463041 DPH6Q7L8W6 267 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 LRRTM3Q86VH5 581 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 MFSD6LQ8IWD5 586 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 TMEM86AQ8N2M4 240 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 LRRC52Q8N7C0 313 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 C1orf127Q8N9H9 656 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 ZSWIM2Q8NEG5 633 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 SPATA18Q8TC71 538 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 SPPL2BQ8TCT7 592 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 DEPDC1BQ8WUY9 529 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 DNASE1L2Q92874 299 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 IRF7Q92985 503 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 PSMG2Q969U7 264 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 SAAL1Q96ER3 474 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 ZSWIM3Q96MP5 696 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 TMEM209Q96SK2 561 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 ACBD6Q9BR61 282 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 CBWD1Q9BRT8 395 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 TRMT61BQ9BVS5 477 aaKnown RBP7.85□□□□□ -1.15
PTPRF-210ENST00000463041 LRRC3Q9BY71 257 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 FGFBP2Q9BYJ0 223 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 DNAJC25Q9H1X3 360 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 CRISPLD1Q9H336 500 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 SEMA4AQ9H3S1 761 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 PDE11AQ9HCR9 933 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 TRPV5Q9NQA5 729 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 FAM86C1Q9NVL1 165 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 GDAP2Q9NXN4 497 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 DLGAP2Q9P1A6 1054 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 CGNQ9P2M7 1197 aaKnown RBP7.85□□□□□ -1.15
PTPRF-210ENST00000463041 ITGA11Q9UKX5 1188 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 MRPS17Q9Y2R5 130 aaKnown RBP7.85□□□□□ -1.15
PTPRF-210ENST00000463041 YIPF1Q9Y548 306 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 FANCMQ8IYD8 2048 aa7.85□□□□□ -1.15
PTPRF-210ENST00000463041 FAM170BA6NMN3 283 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 TULP1O00294 542 aaPredicted RBP7.84□□□□□ -1.15
PTPRF-210ENST00000463041 MAN2B1O00754 1011 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 ITGB3P05106 788 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 DCNP07585 359 aaKnown RBP7.84□□□□□ -1.15
PTPRF-210ENST00000463041 FAM163BP0C2L3 166 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 TMEM191BP0C7N4 346 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 SLFN14P0C7P3 912 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 HAPLN1P10915 354 aaPredicted RBP7.84□□□□□ -1.15
PTPRF-210ENST00000463041 FCARP24071 287 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 WEE1P30291 646 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 POLR2BP30876 1174 aaKnown RBP7.84□□□□□ -1.15
PTPRF-210ENST00000463041 HOXD13P35453 343 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 LHX1P48742 406 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 MLLT6P55198 1093 aaPredicted RBP7.84□□□□□ -1.15
PTPRF-210ENST00000463041 TSPY1Q01534 308 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 EHHADHQ08426 723 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 MYO1EQ12965 1108 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 PSMD2Q13200 908 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 VEPH1Q14D04 833 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 ANGPT1Q15389 498 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 TAF12Q16514 161 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 NFE2Q16621 373 aaPredicted RBP7.84□□□□□ -1.15
PTPRF-210ENST00000463041 FOXD4L6Q3SYB3 417 aaPredicted RBP7.84□□□□□ -1.15
PTPRF-210ENST00000463041 FAM26FQ5R3K3 315 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 FOXD4L3Q6VB84 417 aaPredicted RBP7.84□□□□□ -1.15
PTPRF-210ENST00000463041 ZNF852Q6ZMS4 543 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 TMC8Q8IU68 726 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 C1orf210Q8IVY1 113 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 CEP57L1Q8IYX8 460 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 PJA1Q8NG27 643 aa7.84□□□□□ -1.15
PTPRF-210ENST00000463041 OR10T2Q8NGX3 314 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms