RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 FAM170AA1A519 330 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 USP2O75604 605 aaPredicted RBP3.46□□□□□ -1.86
SMC4-203ENST00000462668 FSBPO95073 299 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 AHSGP02765 367 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 TBXAS1P24557 533 aaPredicted RBP3.46□□□□□ -1.86
SMC4-203ENST00000462668 VIPR2P41587 438 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.46□□□□□ -1.86
SMC4-203ENST00000462668 RALGPS1Q5JS13 557 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 USP49Q70CQ1 688 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 SPPL2CQ8IUH8 684 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 TXLNBQ8N3L3 684 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 SLC16A10Q8TF71 515 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 WDR24Q96S15 920 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 NPAS1Q99742 590 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 MAGEB5Q9BZ81 275 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 SLC39A2Q9NP94 309 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 SLC23A1Q9UHI7 598 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 TMEM59LQ9UK28 342 aa3.46□□□□□ -1.86
SMC4-203ENST00000462668 SAC3D1A6NKF1 404 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 H0Y3Z8 333 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ASNA1O43681 348 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 DKC1O60832 514 aaKnown RBP eCLIP3.45□□□□□ -1.86
SMC4-203ENST00000462668 PRKCAP17252 672 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ECHS1P30084 290 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 SLC6A4P31645 630 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 MAPKAPK2P49137 400 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 HABP2Q14520 560 aaPredicted RBP3.45□□□□□ -1.86
SMC4-203ENST00000462668 PUM1Q14671 1186 aaKnown RBP eCLIP3.45□□□□□ -1.86
SMC4-203ENST00000462668 RTP5Q14D33 572 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 TSTQ16762 297 aaKnown RBP3.45□□□□□ -1.86
SMC4-203ENST00000462668 ZNF362Q5T0B9 420 aaPredicted RBP3.45□□□□□ -1.86
SMC4-203ENST00000462668 ZNF783Q6ZMS7 281 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 CCDC129Q6ZRS4 1044 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 UNC13DQ70J99 1090 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ZMAT2Q96NC0 199 aaKnown RBP3.45□□□□□ -1.86
SMC4-203ENST00000462668 FAM167BQ9BTA0 163 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 MUC13Q9H3R2 512 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 BTG4Q9NY30 223 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 JKAMPQ9P055 326 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 NUDT5Q9UKK9 219 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ITGB1BP2Q9UKP3 347 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 PLEKHM1Q9Y4G2 1056 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 CTDP1Q9Y5B0 961 aaPredicted RBP3.45□□□□□ -1.86
SMC4-203ENST00000462668 PCDHA1Q9Y5I3 950 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 KIAA0355O15063 1070 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ADAM23O75077 832 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ZBED4O75132 1171 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 DDCP20711 480 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ACVR2AP27037 513 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 GALK1P51570 392 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 POU6F2P78424 691 aaPredicted RBP3.45□□□□□ -1.86
SMC4-203ENST00000462668 CD83Q01151 205 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 BECN1Q14457 450 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 CCNG2Q16589 344 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 TIGD5Q53EQ6 642 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 RAP1GAP2Q684P5 730 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 EP400NLQ6ZTU2 488 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 C2CD5Q86YS7 1000 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 FAM181AQ8N9Y4 354 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 HRASLS5Q96KN8 279 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 LANCL2Q9NS86 450 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 FBXO34Q9NWN3 711 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 FSD2A1L4K1 749 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 H0Y858 1186 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 COBLO75128 1261 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 JUPP14923 745 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 MST1P26927 711 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 SCARB2Q14108 478 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 KTI12Q96EK9 354 aaPredicted RBP3.45□□□□□ -1.86
SMC4-203ENST00000462668 MED15Q96RN5 788 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 NUDT22Q9BRQ3 303 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ADAMTS10Q9H324 1103 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 ZBTB26Q9HCK0 441 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 TBX20Q9UMR3 447 aa3.45□□□□□ -1.86
SMC4-203ENST00000462668 CNTNAP5Q8WYK1 1306 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 WDR62O43379 1518 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 TEX33O43247 280 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 INMTO95050 263 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 ITGA2BP08514 1039 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 MLLT6P55198 1093 aaPredicted RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 SLC13A2Q13183 592 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 DCTN1Q14203 1278 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 DUSP28Q4G0W2 176 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 ARHGAP15Q53QZ3 475 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 TMPRSS9Q7Z410 1059 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 RHOT1Q8IXI2 618 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 DYDC2Q96IM9 177 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 ZDHHC7Q9NXF8 308 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 PMS2P1A4D2B8 440 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 RTN3O95197 1032 aaPredicted RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 DNTTP04053 509 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 PROCP04070 461 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 PTMSP20962 102 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 ZEB1P37275 1124 aaPredicted RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 NSUN2Q08J23 767 aaKnown RBP eCLIP3.44□□□□□ -1.86
SMC4-203ENST00000462668 MGAT5Q09328 741 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 DUSP8Q13202 625 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 RAB32Q13637 225 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 NR1I3Q14994 352 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 SURF1Q15526 300 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms