RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 E9PMD0 336 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 ABLIM1O14639 778 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 MARCH6O60337 910 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 MGEA5O60502 916 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 ZNF623O75123 536 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 VTNP04004 478 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 ATF7P17544 494 aaPredicted RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 SCP2P22307 547 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 UBA7P41226 1012 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 NAMPTP43490 491 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 POLGP54098 1239 aaPredicted RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 NLRP11P59045 1033 aaKnown RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 IGBP1P78318 339 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 KRT85P78386 507 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 SMAD3P84022 425 aaKnown RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 MBTD1Q05BQ5 628 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 KARSQ15046 597 aaKnown RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 KIZQ2M2Z5 673 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 ZBTB37Q5TC79 503 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 ALG1LQ6GMV1 187 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 FAM109BQ6ICB4 259 aaPredicted RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 LLGL2Q6P1M3 1020 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 SLC23A3Q6PIS1 610 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 UBE3DQ7Z6J8 389 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 SPACA3Q8IXA5 215 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 CKAP2LQ8IYA6 745 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 ELOA2Q8IYF1 753 aaPredicted RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 ENGASEQ8NFI3 743 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 TMEM174Q8WUU8 243 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 PRPF31Q8WWY3 499 aaKnown RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 ASB11Q8WXH4 323 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 RSPH1Q8WYR4 309 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 FAM168AQ92567 244 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 LARP4BQ92615 738 aaKnown RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 KIFAP3Q92845 792 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 TOP1MTQ969P6 601 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 ZNF689Q96CS4 500 aaPredicted RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 MAP7D2Q96T17 732 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 SLC9A7Q96T83 725 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 LBHD1Q9BQE6 289 aaPredicted RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 SH2D3AQ9BRG2 576 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 FTHL17Q9BXU8 183 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 IFIH1Q9BYX4 1025 aaKnown RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 TNMDQ9H2S6 317 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 ELAC1Q9H777 363 aaKnown RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 MAGEF1Q9HAY2 307 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 CHST12Q9NRB3 414 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 RGS18Q9NS28 235 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 AGPAT5Q9NUQ2 364 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 SUCLA2Q9P2R7 463 aaPredicted RBP6.34□□□□□ -1.39
VPS36-202ENST00000462289 PADI3Q9ULW8 664 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 DNM3Q9UQ16 869 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 PRRC2BQ5JSZ5 2229 aaKnown RBP6.33□□□□□ -1.4
VPS36-202ENST00000462289 CNTNAP2Q9UHC6 1331 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 PLXNA4Q9HCM2 1894 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 NCOR1O75376 2440 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 A0A087WWV3 80 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 A0A087WZ62 844 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 A0A0U1RQF3 1178 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 A0A1B0GUA9 196 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 ENPP3O14638 875 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 GJB5O95377 273 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 PIGRP01833 764 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 FGBP02675 491 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 EDN1P05305 212 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 CTSHP09668 335 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 PLA2G4BP0C869 781 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 ACRP10323 421 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 GHRP10912 638 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 ITIH2P19823 946 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 PROZP22891 400 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 CD52P31358 61 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 DNM2P50570 870 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS36-202ENST00000462289 NCKAP1LP55160 1127 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 SNW1Q13573 536 aaKnown RBP6.33□□□□□ -1.4
VPS36-202ENST00000462289 GIT2Q14161 759 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 LRRC14Q15048 493 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 STK38Q15208 465 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 HABP4Q5JVS0 413 aaKnown RBP6.33□□□□□ -1.4
VPS36-202ENST00000462289 UBXN11Q5T124 520 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 CCDC73Q6ZRK6 1079 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 MRPL10Q7Z7H8 261 aaKnown RBP6.33□□□□□ -1.4
VPS36-202ENST00000462289 KSR1Q8IVT5 923 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 KCT2Q8NC54 265 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 TMEM161BQ8NDZ6 487 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 SPATA20Q8TB22 786 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 SEPT8Q92599 483 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 TMEM143Q96AN5 459 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 CCDC51Q96ER9 411 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 ASB16Q96NS5 453 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 IPO9Q96P70 1041 aaKnown RBP6.33□□□□□ -1.4
VPS36-202ENST00000462289 FDXACB1Q9BRP7 624 aaPredicted RBP6.33□□□□□ -1.4
VPS36-202ENST00000462289 TRIM9Q9C026 710 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 FAM49AQ9H0Q0 323 aaPredicted RBP6.33□□□□□ -1.4
VPS36-202ENST00000462289 POLR3FQ9H1D9 316 aaPredicted RBP6.33□□□□□ -1.4
VPS36-202ENST00000462289 PTPRHQ9HD43 1115 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 GPRC5CQ9NQ84 441 aa6.33□□□□□ -1.4
VPS36-202ENST00000462289 OLFML3Q9NRN5 406 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms