RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 ORC1Q13415 861 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 ASIC2Q16515 512 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 USP41Q3LFD5 358 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 VARS2Q5ST30 1063 aaKnown RBP10.43□□□□□ -0.74
C9orf78-203ENST00000461539 SFMBT2Q5VUG0 894 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 PPP2R2DQ66LE6 453 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 OVOS1Q6IE37 1185 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.43□□□□□ -0.74
C9orf78-203ENST00000461539 TAS1R1Q7RTX1 841 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 LIMS2Q7Z4I7 341 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 SPRED2Q7Z698 418 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 DDX53Q86TM3 631 aaKnown RBP10.43□□□□□ -0.74
C9orf78-203ENST00000461539 CNGA4Q8IV77 575 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 VPS52Q8N1B4 723 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 THEM5Q8N1Q8 247 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 UBR7Q8N806 425 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 RBBP8NLQ8NC74 664 aaPredicted RBP10.43□□□□□ -0.74
C9orf78-203ENST00000461539 KBTBD7Q8WVZ9 684 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 B3GALT6Q96L58 329 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 SAMD11Q96NU1 681 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 TTPALQ9BTX7 342 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 HERC2P3Q9BVR0 1158 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 PLVAPQ9BX97 442 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 NT5C1AQ9BXI3 368 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 GPR88Q9GZN0 384 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 ELOVL4Q9GZR5 314 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 DNAI2Q9GZS0 605 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 NUCKS1Q9H1E3 243 aaKnown RBP10.43□□□□□ -0.74
C9orf78-203ENST00000461539 PRO3102Q9H379 93 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 CERS4Q9HA82 394 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 SLC28A3Q9HAS3 691 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 ZNHIT6Q9NWK9 470 aaKnown RBP10.43□□□□□ -0.74
C9orf78-203ENST00000461539 DDX43Q9NXZ2 648 aaKnown RBP10.43□□□□□ -0.74
C9orf78-203ENST00000461539 HMGXB4Q9UGU5 601 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 MYO6Q9UM54 1294 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 SCN5AQ14524 2016 aa10.43□□□□□ -0.74
C9orf78-203ENST00000461539 C2CD2LO14523 706 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 GABRDO14764 452 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 HCRTO43612 131 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 CSPG5O95196 566 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 SOD2P04179 222 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 URODP06132 367 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 RB1P06400 928 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 CCDC172P0C7W6 258 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 CD19P15391 556 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 FERP16591 822 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 ACAT1P24752 427 aaKnown RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 DNAJB2P25686 324 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 LMO2P25791 158 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 PCSK1P29120 753 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 CA8P35219 290 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 GLUD2P49448 558 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 GSDMDP57764 484 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 ERVK-21P61565 698 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 SMAD3P84022 425 aaKnown RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 INCA1Q0VD86 236 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 CCDC173Q0VFZ6 552 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 CTXN3Q4LDR2 81 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 RTP2Q5QGT7 225 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 ZNF280DQ6N043 979 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 ANKS3Q6ZW76 656 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 CCDC186Q7Z3E2 898 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 UNC93AQ86WB7 457 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 FMNL3Q8IVF7 1028 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 FAM71AQ8IYT1 594 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 FBXO22Q8NEZ5 403 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 OR8K1Q8NGG5 319 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 SPATA18Q8TC71 538 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 WHAMMQ8TF30 809 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 ARNTL2Q8WYA1 636 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 RIN2Q8WYP3 895 aaPredicted RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 TIFAQ96CG3 184 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 HEXIM2Q96MH2 286 aaKnown RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 TWNKQ96RR1 684 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 C11orf84Q9BUA3 381 aaPredicted RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 VN1R3Q9BXE9 311 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 FAM124BQ9H5Z6 455 aaPredicted RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 ALG13Q9NP73 1137 aaKnown RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 STK39Q9UEW8 545 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 COLQQ9Y215 455 aaPredicted RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 STXBP5LQ9Y2K9 1186 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 ALPK3Q96L96 1907 aa10.42□□□□□ -0.74
C9orf78-203ENST00000461539 MKI67P46013 3256 aaKnown RBP10.42□□□□□ -0.74
C9orf78-203ENST00000461539 H7C4K7 107 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 OAZ2O95190 189 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 EFEMP2O95967 443 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 CALCAP01258 141 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 PAEPP09466 180 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 RAD23BP54727 409 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 ARPP19P56211 112 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 BPIFB4P59827 614 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 PSMC1P62191 440 aaKnown RBP10.41□□□□□ -0.74
C9orf78-203ENST00000461539 TSPY1Q01534 308 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 PTK2Q05397 1052 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 BMS1Q14692 1282 aaKnown RBP10.41□□□□□ -0.74
C9orf78-203ENST00000461539 ARID5BQ14865 1188 aa10.41□□□□□ -0.74
C9orf78-203ENST00000461539 TDRD12Q587J7 1177 aaKnown RBP10.41□□□□□ -0.74
C9orf78-203ENST00000461539 E4F1Q66K89 784 aaPredicted RBP10.41□□□□□ -0.74
C9orf78-203ENST00000461539 PRSS55Q6UWB4 352 aaPredicted RBP10.41□□□□□ -0.74
C9orf78-203ENST00000461539 TMC7Q7Z402 723 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms