RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 INMTO95050 263 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 MT-ND5P03915 603 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 MYL4P12829 197 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 XRCC6P12956 609 aaKnown RBP eCLIP3.78□□□□□ -1.8
VCL-203ENST00000461383 IDEP14735 1019 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 HK1P19367 917 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 EEF1GP26641 437 aaKnown RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 SLC6A4P31645 630 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 GRK6P43250 576 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 HSPA7P48741 367 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 SLC11A2P49281 568 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 UCP3P55916 312 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 HHEXQ03014 270 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 DUSP8Q13202 625 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 PUM3Q15397 648 aaKnown RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 MPEG1Q2M385 716 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 SLC35G1Q2M3R5 365 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 PRR16Q569H4 304 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 CRB2Q5IJ48 1285 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 RRAGBQ5VZM2 374 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 SLFN13Q68D06 897 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 YAF2Q8IY57 180 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 GSPT2Q8IYD1 628 aaKnown RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 ELOA2Q8IYF1 753 aaPredicted RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 D2HGDHQ8N465 521 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 MYCT1Q8N699 235 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 RNF152Q8N8N0 203 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 OR10H5Q8NGA6 315 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 SMCR8Q8TEV9 937 aaPredicted RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 RAPGEF4Q8WZA2 1011 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 SPSB4Q96A44 273 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 MOGAT1Q96PD6 335 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 NAP1L4Q99733 375 aaKnown RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 PAGR1Q9BTK6 254 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 EIF2AQ9BY44 585 aaKnown RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 DPH1Q9BZG8 443 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 TINAGL1Q9GZM7 467 aaPredicted RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 MS4A7Q9GZW8 240 aaPredicted RBP3.78□□□□□ -1.8
VCL-203ENST00000461383 MYLK2Q9H1R3 596 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 ADAM7Q9H2U9 754 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 SMURF2Q9HAU4 748 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 GPR35Q9HC97 309 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 GJB4Q9NTQ9 266 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 PLA2G3Q9NZ20 509 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 MYO1AQ9UBC5 1043 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 XPR1Q9UBH6 696 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.78□□□□□ -1.8
VCL-203ENST00000461383 CDYLQ9Y232 598 aa3.78□□□□□ -1.8
VCL-203ENST00000461383 NPEPPSL1A6NEC2 478 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 PRSS29PA6NIE9 313 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 PODXLO00592 558 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 HNRNPDLO14979 420 aaKnown RBP3.77□□□□□ -1.81
VCL-203ENST00000461383 PIP5K1CO60331 668 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 VPS4BO75351 444 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 KIF20AO95235 890 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 PIM1P11309 404 aaPredicted RBP3.77□□□□□ -1.81
VCL-203ENST00000461383 TYRP1P17643 537 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 SLC6A2P23975 617 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 MSX2P35548 267 aaPredicted RBP3.77□□□□□ -1.81
VCL-203ENST00000461383 PIGFQ07326 219 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 ZNF844Q08AG5 666 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 DCAF12L1Q5VU92 463 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 FAM160B1Q5W0V3 765 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 LAYNQ6UX15 382 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 DBX2Q6ZNG2 339 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 MICU3Q86XE3 530 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 PDPRQ8NCN5 879 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 TMIEQ8NEW7 156 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 ATXN2LQ8WWM7 1075 aaKnown RBP3.77□□□□□ -1.81
VCL-203ENST00000461383 MAML1Q92585 1016 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 KLHL32Q96NJ5 620 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 GNRHR2Q96P88 292 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 PPP1R9BQ96SB3 815 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 MPHOSPH9Q99550 1183 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 SMOQ99835 787 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 TTLL2Q9BWV7 592 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 LSM14BQ9BX40 385 aaKnown RBP3.77□□□□□ -1.81
VCL-203ENST00000461383 MAGEB5Q9BZ81 275 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 TTYH3Q9C0H2 523 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 CHST8Q9H2A9 424 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 LUZP4Q9P127 313 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 LRFN1Q9P244 771 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 SLC39A10Q9ULF5 831 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 AGAP1Q9UPQ3 857 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 MAN2B2Q9Y2E5 1009 aa3.77□□□□□ -1.81
VCL-203ENST00000461383 A0A087WWL8 130 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 OTOL1A6NHN0 477 aaPredicted RBP3.76□□□□□ -1.81
VCL-203ENST00000461383 DRGXA6NNA5 263 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 RAB27BO00194 218 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 POLRMTO00411 1230 aaKnown RBP3.76□□□□□ -1.81
VCL-203ENST00000461383 PLA2G6O60733 806 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 ERN1O75460 977 aaKnown RBP3.76□□□□□ -1.81
VCL-203ENST00000461383 DNAJB5O75953 348 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 CSTBP04080 98 aaKnown RBP3.76□□□□□ -1.81
VCL-203ENST00000461383 CYP2C9P11712 490 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 CKBP12277 381 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 CNR2P34972 360 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 CCT5P48643 541 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 ALDH9A1P49189 494 aa3.76□□□□□ -1.81
VCL-203ENST00000461383 CHN2P52757 468 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms