RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ADPGKQ9BRR6 497 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 ADAMTS10Q9H324 1103 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 SMYD3Q9H7B4 428 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 CYP3A43Q9HB55 503 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 GNEQ9Y223 722 aaKnown RBP21.45■■□□□ 1.02
CCM2-203ENST00000461377 C2CD2Q9Y426 696 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 MED7O43513 233 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 GRM5P41594 1212 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 CDH8P55286 799 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 DHX9Q08211 1270 aaKnown RBP21.45■■□□□ 1.02
CCM2-203ENST00000461377 SPDYCQ5MJ68 293 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 ERICH1Q86X53 443 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 ACAP3Q96P50 834 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 USTQ9Y2C2 406 aa21.45■■□□□ 1.02
CCM2-203ENST00000461377 ERICH4A6NGS2 130 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 DYNC1LI2O43237 492 aaPredicted RBP21.44■■□□□ 1.02
CCM2-203ENST00000461377 F2P00734 622 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 CD19P15391 556 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 POLR2BP30876 1174 aaKnown RBP21.44■■□□□ 1.02
CCM2-203ENST00000461377 RPL21P46778 160 aaKnown RBP21.44■■□□□ 1.02
CCM2-203ENST00000461377 KCNJ1P48048 391 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 TAP1Q03518 808 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 ZNF252P-AS1Q0IIN9 211 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 LLGL1Q15334 1064 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 PRAMEF19Q5SWL8 479 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 NT5DC4Q86YG4 428 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 SLC4A11Q8NBS3 891 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 C1orf54Q8WWF1 131 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 ITGA11Q9UKX5 1188 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 PASKQ96RG2 1323 aa21.44■■□□□ 1.02
CCM2-203ENST00000461377 SRCAPQ6ZRS2 3230 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 CILPO75339 1184 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 ECEL1O95672 775 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 STAU1O95793 577 aaKnown RBP21.43■■□□□ 1.02
CCM2-203ENST00000461377 CAPN2P17655 700 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 FGFR4P22455 802 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 KLF1Q13351 362 aaPredicted RBP21.43■■□□□ 1.02
CCM2-203ENST00000461377 KIZQ2M2Z5 673 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 DCAF4L1Q3SXM0 396 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 C3orf20Q8ND61 904 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 EXD1Q8NHP7 514 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 UBLCP1Q8WVY7 318 aaPredicted RBP21.43■■□□□ 1.02
CCM2-203ENST00000461377 MCEEQ96PE7 176 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 PARP2Q9UGN5 583 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 IGF2BP3O00425 579 aaKnown RBP eCLIP21.43■■□□□ 1.02
CCM2-203ENST00000461377 SMIM10L2AP0DMW4 78 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 SMIM10L2BP0DMW5 78 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 P4HA1P13674 534 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 PLTPP55058 493 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 HUNKP57058 714 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 CEP85LQ5SZL2 805 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 FBXO25Q8TCJ0 367 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 KAT2BQ92831 832 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 HPDLQ96IR7 371 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 TWNKQ96RR1 684 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 DCLK3Q9C098 648 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 ELOVL4Q9GZR5 314 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 FLRT1Q9NZU1 646 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 STRIP2Q9ULQ0 834 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 AGAP1Q9UPQ3 857 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 NRCAMQ92823 1304 aa21.43■■□□□ 1.02
CCM2-203ENST00000461377 GPR32O75388 356 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 ZNF865P0CJ78 1059 aaPredicted RBP21.42■■□□□ 1.02
CCM2-203ENST00000461377 RALAP11233 206 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 CDC42EP1Q00587 391 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 OGDHQ02218 1023 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 PTPN11Q06124 597 aaPredicted RBP21.42■■□□□ 1.02
CCM2-203ENST00000461377 PTPN20Q4JDL3 420 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 RASAL3Q86YV0 1011 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 CCDC50Q8IVM0 306 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 GCOM2Q9BZD3 368 aaPredicted RBP21.42■■□□□ 1.02
CCM2-203ENST00000461377 FAM49AQ9H0Q0 323 aaPredicted RBP21.42■■□□□ 1.02
CCM2-203ENST00000461377 TMBIM4Q9HC24 238 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 CHST7Q9NS84 486 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 DPP3Q9NY33 737 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 HMGXB4Q9UGU5 601 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 PRDM4Q9UKN5 801 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 PTPN22Q9Y2R2 807 aa21.42■■□□□ 1.02
CCM2-203ENST00000461377 MBLAC1A4D2B0 266 aaPredicted RBP21.41■■□□□ 1.02
CCM2-203ENST00000461377 RBP5P82980 135 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 CYP4A22Q5TCH4 519 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 LRRC38Q5VT99 294 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 DCUN1D2Q6PH85 259 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 NIPA2Q8N8Q9 360 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 TMEM176AQ96HP8 235 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 FAM129AQ9BZQ8 928 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 CYTH4Q9UIA0 394 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 SMIM35A0A1B0GVV1 85 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 SHOX2O60902 331 aaPredicted RBP21.41■■□□□ 1.02
CCM2-203ENST00000461377 HOXA11P31270 313 aaPredicted RBP21.41■■□□□ 1.02
CCM2-203ENST00000461377 SSR1P43307 286 aaKnown RBP21.41■■□□□ 1.02
CCM2-203ENST00000461377 GSCP56915 257 aaPredicted RBP21.41■■□□□ 1.02
CCM2-203ENST00000461377 ZNF844Q08AG5 666 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 OLFML2BQ68BL8 750 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 TLK2Q86UE8 772 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 USP6NLQ92738 828 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 ATP6V1G3Q96LB4 118 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 OSBPL8Q9BZF1 889 aa21.41■■□□□ 1.02
CCM2-203ENST00000461377 FAM124BQ9H5Z6 455 aaPredicted RBP21.41■■□□□ 1.02
CCM2-203ENST00000461377 ATP8A1Q9Y2Q0 1164 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms