RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 USP39Q53GS9 565 aaKnown RBP4.09□□□□□ -1.75
CCDC93-204ENST00000460781 COBLL1Q53SF7 1204 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 RNF220Q5VTB9 566 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 MAMDC4Q6UXC1 1216 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 Q6ZRM9 215 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 MAEAQ7L5Y9 396 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 GDF7Q7Z4P5 450 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 C11orf96Q7Z7L8 435 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 MPP5Q8N3R9 675 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 ACRBPQ8NEB7 543 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 IL17RDQ8NFM7 739 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 DNERQ8NFT8 737 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 OR6B3Q8NGW1 331 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 NUP133Q8WUM0 1156 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 RNF31Q96EP0 1072 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 CNPPD1Q9BV87 410 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 LSM14BQ9BX40 385 aaKnown RBP4.09□□□□□ -1.75
CCDC93-204ENST00000460781 RSAD1Q9HA92 442 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 ZNF287Q9HBT7 754 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 KIAA1586Q9HCI6 787 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 SRRDQ9UH36 339 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 PCDHA6Q9UN73 950 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 NEU2Q9Y3R4 380 aa4.09□□□□□ -1.75
CCDC93-204ENST00000460781 SPAG9O60271 1321 aaKnown RBP4.09□□□□□ -1.75
CCDC93-204ENST00000460781 SCAF11Q99590 1463 aaKnown RBP4.09□□□□□ -1.75
CCDC93-204ENST00000460781 PRDM15P57071 1507 aaPredicted RBP4.09□□□□□ -1.75
CCDC93-204ENST00000460781 KDM5AP29375 1690 aaKnown RBP4.09□□□□□ -1.76
CCDC93-204ENST00000460781 SHPRHQ149N8 1683 aa4.09□□□□□ -1.76
CCDC93-204ENST00000460781 DRGXA6NNA5 263 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 M0QYG6 137 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 TPP1O14773 563 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 PHLPP1O60346 1717 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 SLC43A1O75387 559 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 IFIT2P09913 472 aaKnown RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 ZKSCAN1P17029 563 aaPredicted RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 PEX2P28328 305 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 PRDX5P30044 214 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 NKTRP30414 1462 aaKnown RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 PTGS2P35354 604 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 GNALP38405 381 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 PHKA1P46020 1223 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 FXR1P51114 621 aaKnown RBP eCLIP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 SCNN1GP51170 649 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 SOX8P57073 446 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 PURAQ00577 322 aaKnown RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 ARHGEF5Q12774 1597 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 RAB32Q13637 225 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 DIP2AQ14689 1571 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 POLD3Q15054 466 aaPredicted RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 SAFBQ15424 915 aaKnown RBP eCLIP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 TIGD2Q4W5G0 525 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 ATRNL1Q5VV63 1379 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 LMBRD2Q68DH5 695 aaPredicted RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 ARMC6Q6NXE6 501 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 B3GNT9Q6UX72 402 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 CCDC141Q6ZP82 1450 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 LRRC9Q6ZRR7 1453 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 DHX29Q7Z478 1369 aaKnown RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 PDSS2Q86YH6 399 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 RHOT2Q8IXI1 618 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 COLGALT2Q8IYK4 626 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 EHBP1L1Q8N3D4 1523 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 FAM156AQ8NDB6 213 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 SMCR8Q8TEV9 937 aaPredicted RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 IPCEF1Q8WWN9 437 aaPredicted RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 SCAMP4Q969E2 229 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 TNIP3Q96KP6 325 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 PLEKHG4BQ96PX9 1271 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 MED15Q96RN5 788 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 RBM15Q96T37 977 aaKnown RBP eCLIP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 ZNF341Q9BYN7 854 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 CPEB1Q9BZB8 566 aaKnown RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 NUP62CLQ9H1M0 184 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 KCNH6Q9H252 994 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 TESQ9UGI8 421 aaKnown RBP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 MAST1Q9Y2H9 1570 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 TMX2Q9Y320 296 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.08□□□□□ -1.76
CCDC93-204ENST00000460781 FPGT-TNNI3KV9GXZ4 949 aa4.08□□□□□ -1.76
CCDC93-204ENST00000460781 TET3O43151 1660 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 PIK3C2BO00750 1634 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 AHDC1Q5TGY3 1603 aaPredicted RBP4.07□□□□□ -1.76
CCDC93-204ENST00000460781 CDK12Q9NYV4 1490 aaPredicted RBP4.07□□□□□ -1.76
CCDC93-204ENST00000460781 A0A088AWK7 358 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 GAGE12BA1L429 117 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 GAGE12HA6NDE8 117 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 BTBD11A6QL63 1104 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 FOXN3O00409 490 aaPredicted RBP4.07□□□□□ -1.76
CCDC93-204ENST00000460781 POLRMTO00411 1230 aaKnown RBP4.07□□□□□ -1.76
CCDC93-204ENST00000460781 FAM20BO75063 409 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 AHSGP02765 367 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 KITP10721 976 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 XRCC6P12956 609 aaKnown RBP eCLIP4.07□□□□□ -1.76
CCDC93-204ENST00000460781 RPL17P18621 184 aaKnown RBP4.07□□□□□ -1.76
CCDC93-204ENST00000460781 LAG3P18627 525 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 POU6F2P78424 691 aaPredicted RBP4.07□□□□□ -1.76
CCDC93-204ENST00000460781 EXOSC9Q06265 439 aaKnown RBP4.07□□□□□ -1.76
CCDC93-204ENST00000460781 RABL3Q5HYI8 236 aa4.07□□□□□ -1.76
CCDC93-204ENST00000460781 NAIF1Q69YI7 327 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms