RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 ZNF215Q9UL58 517 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 PADI3Q9ULW8 664 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 PCDHGA5Q9Y5G8 931 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 ADAMTS9Q9P2N4 1935 aa4.64□□□□□ -1.67
ECHDC1-211ENST00000460558 DENND3A2RUS2 1198 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 H0Y626 953 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 NOP56O00567 594 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 CAPN9O14815 690 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 PPP1R12AO14974 1030 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 CLEC3AO75596 197 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 EIF3JO75822 258 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 WFS1O76024 890 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 TRIM16O95361 564 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 GGPS1O95749 300 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 EPHX1P07099 455 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 MPLP40238 635 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 PBX3P40426 434 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 ASPAP45381 313 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 CXCL12P48061 93 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 FNTBP49356 437 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 IGBP1P78318 339 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 OS9Q13438 667 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 CCDC96Q2M329 555 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 CTR9Q6PD62 1173 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 SEZ6L2Q6UXD5 910 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 SLC24A5Q71RS6 500 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 MTSS1LQ765P7 747 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 DYMQ7RTS9 669 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 ABI1Q8IZP0 508 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 VPS52Q8N1B4 723 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 DNAJB3Q8WWF6 145 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 SMG7Q92540 1137 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 NINJ1Q92982 152 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 PHKBQ93100 1093 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 RCC1LQ96I51 464 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 FAM46AQ96IP4 442 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 RMDN3Q96TC7 470 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 TMEM117Q9H0C3 514 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 ZBP1Q9H171 429 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 MLXIPQ9HAP2 919 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 ATP6V0A4Q9HBG4 840 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 NCOA5Q9HCD5 579 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 TMEM161AQ9NX61 479 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 APEX2Q9UBZ4 518 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 DPP7Q9UHL4 492 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 TUBE1Q9UJT0 475 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 DBNLQ9UJU6 430 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 PCOLCE2Q9UKZ9 415 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 MKL2Q9ULH7 1088 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 CEP131Q9UPN4 1083 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 ZFP37Q9Y6Q3 630 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 ZBED9Q6R2W3 1325 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 IGSF9BQ9UPX0 1349 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 PLIN4Q96Q06 1357 aa4.63□□□□□ -1.67
ECHDC1-211ENST00000460558 COL12A1Q99715 3063 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 CEP192Q8TEP8 1941 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 FLNCQ14315 2725 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 CCDC195A0A1B0GUA6 201 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TCRBV5S4A2TA0A5A2 114 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 SHISA7A6NL88 538 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 ENO4A6NNW6 628 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 FAM229AH3BQW9 127 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 AGRPO00253 132 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 INPPL1O15357 1258 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 GNAI3P08754 354 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TSPY3P0CV98 308 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TSPY8P0CW00 308 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TGFB3P10600 412 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 CTSAP10619 480 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 FGFR1P11362 822 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 LORP23490 312 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 KLRC2P26717 231 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 GBP1P32455 592 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 RAP1GAPP47736 663 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 PREPP48147 710 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 ALDH7A1P49419 539 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 CLCN4P51793 760 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 POLGP54098 1239 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 FZD5Q13467 585 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 WTAPQ15007 396 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 FNDC3BQ53EP0 1204 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 ODR4Q5SWX8 454 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 SYDE2Q5VT97 1194 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 ARHGEF16Q5VV41 709 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TDRD10Q5VZ19 366 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 HEATR6Q6AI08 1181 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TCEAL6Q6IPX3 200 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 FDX2Q6P4F2 183 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 GET4Q7L5D6 327 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 CACNA2D4Q7Z3S7 1137 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 ZNF227Q86WZ6 799 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 STK11IPQ8N1F8 1099 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 SLC39A11Q8N1S5 342 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 SVOPQ8N4V2 548 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 DEFB124Q8NES8 71 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 NEDD1Q8NHV4 660 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 AUTS2Q8WXX7 1259 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 FGF14Q92915 247 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 TCEAL3Q969E4 200 aa4.62□□□□□ -1.67
ECHDC1-211ENST00000460558 MRGPRX3Q96LB0 322 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms