RNA–Protein interactions for RNA: ENST00000459908.5

ATP11A-208, Transcript of ATPase phospholipid transporting 11A, human

TSL 2

Gene ATP11A, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP11A-208	ENST00000459908	CEP112	Q8N8E3	955 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	DNAJC19	Q96DA6	116 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	ELOVL4	Q9GZR5	314 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	DYRK4	Q9NR20	520 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	FHOD1	Q9Y613	1164 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	CASZ1	Q86V15	1759 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	MAP3K7CL	P57077	242 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	EHHADH	Q08426	723 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	LLGL1	Q15334	1064 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	E2F4	Q16254	413 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	PABPC1L	Q4VXU2	614 aa	Known RBP	11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	CHSY1	Q86X52	802 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	ECHDC2	Q86YB7	292 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	TSPAN18	Q96SJ8	248 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	LCMT1	Q9UIC8	334 aa		11.17	□□□□□ -0.62
ATP11A-208	ENST00000459908	SMIM28	A0A1B0GU29	152 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	MFAP3L	O75121	409 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	BRCC3	P46736	316 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	FAM228A	Q86W67	206 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	GIPC2	Q8TF65	315 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	TMEM176A	Q96HP8	235 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	EPAS1	Q99814	870 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	EIF2A	Q9BY44	585 aa	Known RBP	11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	FBXO44	Q9H4M3	255 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	DHX35	Q9H5Z1	703 aa	Known RBP	11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	ASAH2	Q9NR71	780 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	MYH1	P12882	1939 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	TTC26	A0AVF1	554 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	TTLL13P	A6NNM8	815 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	GRAP2	O75791	330 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	MYBL1	P10243	752 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	TNFSF9	P41273	254 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	SLC11A2	P49281	568 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	CASP5	P51878	434 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	NDST1	P52848	882 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	TTI2	Q6NXR4	508 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	SLC7A14	Q8TBB6	771 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	BSND	Q8WZ55	320 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	BHMT	Q93088	406 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	PARVA	Q9NVD7	372 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	PITPNM1	O00562	1244 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	SRGAP2	O75044	1071 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	IQCF3	P0C7M6	154 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	MBTD1	Q05BQ5	628 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	DEUP1	Q05D60	604 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	CFAP221	Q4G0U5	840 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	GPR161	Q8N6U8	529 aa	Known RBP	11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	UCMA	Q8WVF2	138 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	CORO1B	Q9BR76	489 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	ARHGAP28	Q9P2N2	729 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	GNE	Q9Y223	722 aa	Known RBP	11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	DDX60	Q8IY21	1712 aa	Known RBP	11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	MCF2L	O15068	1137 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	TAP1	Q03518	808 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	EPC2	Q52LR7	807 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	EFCAB13	Q8IY85	973 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	CPA5	Q8WXQ8	436 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	TCF25	Q9BQ70	676 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	PDZD7	Q9H5P4	517 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	ADAM28	Q9UKQ2	775 aa		11.16	□□□□□ -0.62
ATP11A-208	ENST00000459908	MYZAP	P0CAP1	466 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	YWHAQ	P27348	245 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	POU5F1B	Q06416	359 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	MFSD5	Q6N075	450 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	MMS22L	Q6ZRQ5	1243 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	ADAT2	Q7Z6V5	191 aa	Known RBP	11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	DIS3L	Q8TF46	1054 aa	Known RBP	11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	RSPH1	Q8WYR4	309 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	SMARCD1	Q96GM5	515 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	RAD9A	Q99638	391 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	TLR8	Q9NR97	1041 aa	Known RBP	11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	GTF3C4	Q9UKN8	822 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	RGS20	O76081	388 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	TIMP1	P01033	207 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	COG7	P83436	770 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	TFDP2	Q14188	446 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	CCDC85B	Q15834	202 aa	Predicted RBP	11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	FUT10	Q6P4F1	479 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	TRIM65	Q6PJ69	517 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908	IP6K2	Q9UHH9	426 aa		11.15	□□□□□ -0.62
ATP11A-208	ENST00000459908		A0A0B4J269	797 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	OR6C75	A6NL08	312 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	SLC4A1	P02730	911 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	SLC2A3	P11169	496 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	BDNF	P23560	247 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	KPNA1	P52294	538 aa	Predicted RBP	11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	CDH8	P55286	799 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	ARSH	Q5FYA8	562 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	KLHL7	Q8IXQ5	586 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	SLC30A5	Q8TAD4	765 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	CSGALNACT1	Q8TDX6	532 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	TRIM31	Q9BZY9	425 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	ZKSCAN5	Q9Y2L8	839 aa		11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.15	□□□□□ -0.63
ATP11A-208	ENST00000459908		A0A0U1RQF3	1178 aa		11.14	□□□□□ -0.63
ATP11A-208	ENST00000459908	ARL5C	A6NH57	179 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms