RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ANAPC1Q9H1A4 1944 aa10.8□□□□□ -0.68
HDLBP-228ENST00000459788 ZNF292O60281 2723 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 KANSL1LA0AUZ9 987 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ZNF233A6NK53 670 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 TISP43B9A030 160 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 PPEF2O14830 753 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 SPTLC1O15269 473 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 VNN2O95498 520 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 CEBPBP17676 345 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 RFX1P22670 979 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ME1P48163 572 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 CASP5P51878 434 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 GPC5P78333 572 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ASIC1P78348 528 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 RBP5P82980 135 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 VEPH1Q14D04 833 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 MLF2Q15773 248 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-228ENST00000459788 BMT2Q1RMZ1 405 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 FAM26FQ5R3K3 315 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ALYREFQ86V81 257 aaKnown RBP10.79□□□□□ -0.68
HDLBP-228ENST00000459788 C12orf56Q8IXR9 622 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 TOP6BLQ8N6T0 577 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 GOLGA5Q8TBA6 731 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ATOH1Q92858 354 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-228ENST00000459788 IRF7Q92985 503 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 CEP295NLQ96MC4 621 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ASB16Q96NS5 453 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ACBD6Q9BR61 282 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 IER2Q9BTL4 223 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 LRRC3Q9BY71 257 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 PANK2Q9BZ23 570 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ABCB6Q9NP58 842 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 OBP2AQ9NY56 170 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 TBC1D7Q9P0N9 293 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 PCDHA7Q9UN72 937 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 MRPS17Q9Y2R5 130 aaKnown RBP10.79□□□□□ -0.68
HDLBP-228ENST00000459788 SIT1Q9Y3P8 196 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 ATP6V1DQ9Y5K8 247 aa10.79□□□□□ -0.68
HDLBP-228ENST00000459788 TIMM13Q9Y5L4 95 aaPredicted RBP10.79□□□□□ -0.68
HDLBP-228ENST00000459788 GVINP1Q7Z2Y8 2422 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 MAN2B1O00754 1011 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 NCAM2O15394 837 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 POLR2DO15514 142 aaKnown RBP10.78□□□□□ -0.68
HDLBP-228ENST00000459788 HUS1O60921 280 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 MOSPD3O75425 235 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 PRPF6O94906 941 aaKnown RBP10.78□□□□□ -0.68
HDLBP-228ENST00000459788 SLFN14P0C7P3 912 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 PSMC3P17980 439 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 FCARP24071 287 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 CDC25CP30307 473 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 LHX1P48742 406 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 GUCY2FP51841 1108 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 TSPY1Q01534 308 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 MYO1EQ12965 1108 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 DUSP4Q13115 394 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 PSMD2Q13200 908 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 DUOXA2Q1HG44 320 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 SLC44A4Q53GD3 710 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 MAMSTRQ6ZN01 415 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 HS2ST1Q7LGA3 356 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 LIMS2Q7Z4I7 341 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 TMC8Q8IU68 726 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 WDR49Q8IV35 697 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 MFSD6LQ8IWD5 586 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 C1orf127Q8N9H9 656 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 PJA1Q8NG27 643 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 CXorf38Q8TB03 319 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 DHX58Q96C10 678 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 MCRS1Q96EZ8 462 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 ANKRD36BP1Q96IX9 119 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 CBWD1Q9BRT8 395 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 INTS13Q9NVM9 706 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 DLGAP2Q9P1A6 1054 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 CA14Q9ULX7 337 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 R3HCC1Q9Y3T6 440 aaKnown RBP10.78□□□□□ -0.68
HDLBP-228ENST00000459788 WDR87Q6ZQQ6 2873 aa10.78□□□□□ -0.68
HDLBP-228ENST00000459788 SPTBN4Q9H254 2564 aa10.77□□□□□ -0.68
HDLBP-228ENST00000459788 MYO15AQ9UKN7 3530 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 VPS13AQ96RL7 3174 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 STK25O00506 426 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 TNNC2P02585 160 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 ITGB3P05106 788 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 TMEM191BP0C7N4 346 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 CMA1P23946 247 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 DDX6P26196 483 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDLBP-228ENST00000459788 PCSK1P29120 753 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 CCR2P41597 374 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 RPS9P46781 194 aaKnown RBP10.77□□□□□ -0.69
HDLBP-228ENST00000459788 TFAMQ00059 246 aaKnown RBP10.77□□□□□ -0.69
HDLBP-228ENST00000459788 MYL7Q01449 175 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 ZNF528Q3MIS6 628 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 ARHGAP15Q53QZ3 475 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 FAM78AQ5JUQ0 283 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 TANGO2Q6ICL3 276 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 DNAJB7Q7Z6W7 309 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-228ENST00000459788 CEP57L1Q8IYX8 460 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 OR10T2Q8NGX3 314 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 ING5Q8WYH8 240 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 CLDN23Q96B33 292 aa10.77□□□□□ -0.69
HDLBP-228ENST00000459788 SAAL1Q96ER3 474 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms