RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 CHMP2BQ9UQN3 213 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 MAST1Q9Y2H9 1570 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 ITGB6P18564 788 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 ALDH9A1P49189 494 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 CPA4Q9UI42 421 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 SNX8Q9Y5X2 465 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 CCDC85CA6NKD9 419 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 CCDC188H7C350 402 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 STAG3L1P0CL83 205 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 DOK6Q6PKX4 331 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 MTHFD1LQ6UB35 978 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 RNF103O00237 685 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 PARNO95453 639 aaKnown RBP16.74■□□□□ 0.27
HDAC7-217ENST00000459625 CAV1Q03135 178 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 EXD1Q8NHP7 514 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 ZNF512BQ96KM6 892 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-217ENST00000459625 MOV10L1Q9BXT6 1211 aaKnown RBP16.74■□□□□ 0.27
HDAC7-217ENST00000459625 BARHL2Q9NY43 387 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 ZC3H7BQ9UGR2 993 aaKnown RBP16.74■□□□□ 0.27
HDAC7-217ENST00000459625 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 ITGB3P05106 788 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 BRINP3Q76B58 766 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 MRPS31Q92665 395 aaKnown RBP16.74■□□□□ 0.27
HDAC7-217ENST00000459625 FBXO32Q969P5 355 aa16.74■□□□□ 0.27
HDAC7-217ENST00000459625 ACTR5Q9H9F9 607 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-217ENST00000459625 TSC22D1Q15714 1073 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 TTC39CQ8N584 583 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 PADI4Q9UM07 663 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 PSMD12O00232 456 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 URODP06132 367 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 PLOD1Q02809 727 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 RARS2Q5T160 578 aaKnown RBP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 RBBP8NLQ8NC74 664 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 TADA1Q96BN2 335 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 MED8Q96G25 268 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 TSPAN3O60637 253 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 VTNP04004 478 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 AKAP5P24588 427 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 CDC27P30260 824 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 CNTN1Q12860 1018 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 CLEC16AQ2KHT3 1053 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 KRT84Q9NSB2 600 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 STX7O15400 261 aaKnown RBP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 LIFRP42702 1097 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 CLCN6P51797 869 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 RAD23BP54727 409 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 C4orf33Q8N1A6 199 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 OSBPL9Q96SU4 736 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 MRPL1Q9BYD6 325 aaKnown RBP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 LCMT1Q9UIC8 334 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 KIF24Q5T7B8 1368 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 A8MX80 341 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 TEX33O43247 280 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 VCLP18206 1134 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 SLC11A2P49281 568 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 ACTN3Q08043 901 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 TRIM72Q6ZMU5 477 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 CCDC60Q8IWA6 550 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 ETNK1Q9HBU6 452 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 NEUROD4Q9HD90 331 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDAC7-217ENST00000459625 CDYLQ9Y232 598 aa16.73■□□□□ 0.27
HDAC7-217ENST00000459625 LRRIQ3A6PVS8 624 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-217ENST00000459625 LGALS16A8MUM7 142 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 TOMM70O94826 608 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 ODC1P11926 461 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 KLRC2P26717 231 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 LONRF1Q17RB8 773 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 ZC2HC1CQ53FD0 456 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-217ENST00000459625 TRIM65Q6PJ69 517 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 NT5C1AQ9BXI3 368 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 OSBPL1AQ9BXW6 950 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 AMACRQ9UHK6 382 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 B3GAT3O94766 335 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 POU1F1P28069 291 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 S100A5P33763 92 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 TAP1Q03518 808 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 HIC1Q14526 733 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 MTFR1Q15390 333 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 B3GALNT2Q8NCR0 500 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 MYCBPQ99417 103 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-217ENST00000459625 MYOZ2Q9NPC6 264 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 NOP53Q9NZM5 478 aaKnown RBP16.72■□□□□ 0.27
HDAC7-217ENST00000459625 A0A087X0T9 212 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 PSMD3O43242 534 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 FAM200BP0CF97 657 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 DPEP1P16444 411 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 PCSK1P29120 753 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 MLH1P40692 756 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 EPHA7Q15375 998 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 SYTL1Q8IYJ3 562 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 PIF1Q9H611 641 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 WDCPQ9H6R7 721 aa16.72■□□□□ 0.27
HDAC7-217ENST00000459625 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-217ENST00000459625 F5H5T6 163 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms