RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 NT5DC4Q86YG4 428 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 C1orf210Q8IVY1 113 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 BRSK2Q8IWQ3 736 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 SHKBP1Q8TBC3 707 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 ZSCAN18Q8TBC5 510 aaPredicted RBP13.39□□□□□ -0.27
SMCR2-201ENST00000456090 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
SMCR2-201ENST00000456090 FOXD4L4Q8WXT5 416 aaPredicted RBP13.39□□□□□ -0.27
SMCR2-201ENST00000456090 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
SMCR2-201ENST00000456090 CBWD1Q9BRT8 395 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 TRMT61BQ9BVS5 477 aaKnown RBP13.39□□□□□ -0.27
SMCR2-201ENST00000456090 LRRC3Q9BY71 257 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 TNMDQ9H2S6 317 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 BRD9Q9H8M2 597 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 LTB4R2Q9NPC1 389 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 RBAKQ9NYW8 714 aaPredicted RBP13.39□□□□□ -0.27
SMCR2-201ENST00000456090 GREB1Q4ZG55 1949 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 ANAPC1Q9H1A4 1944 aa13.39□□□□□ -0.27
SMCR2-201ENST00000456090 OTOGLQ3ZCN5 2332 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 KPNA7A9QM74 516 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 PPP6R2O75170 966 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 PRPF6O94906 941 aaKnown RBP13.38□□□□□ -0.27
SMCR2-201ENST00000456090 LDHAP00338 332 aaKnown RBP13.38□□□□□ -0.27
SMCR2-201ENST00000456090 PSMC3P17980 439 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 VIPR2P41587 438 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
SMCR2-201ENST00000456090 E2F4Q16254 413 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 SV2CQ496J9 727 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 WSCD1Q658N2 575 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 VITQ6UXI7 678 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 ZNF852Q6ZMS4 543 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 METTL23Q86XA0 190 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 CCDC65Q8IXS2 484 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 SNX21Q969T3 373 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 PSMG2Q969U7 264 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 ZNF560Q96MR9 790 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 SEPT5Q99719 369 aaPredicted RBP13.38□□□□□ -0.27
SMCR2-201ENST00000456090 OSBPL6Q9BZF3 934 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 ZCWPW1Q9H0M4 648 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 PCIF1Q9H4Z3 704 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 HSFX1Q9UBD0 423 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 R4GN57 208 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 PTPRDP23468 1912 aa13.38□□□□□ -0.27
SMCR2-201ENST00000456090 ATG2BQ96BY7 2078 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 EXTL3O43909 919 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 ITGB3P05106 788 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 HSP90AA1P07900 732 aaKnown RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 TARSP26639 723 aaKnown RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 POLR2BP30876 1174 aaKnown RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 GDI1P31150 447 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 TUFMP49411 452 aaKnown RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 FOXD4L6Q3SYB3 417 aaPredicted RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 MGAT5BQ3V5L5 792 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 STXBP5Q5T5C0 1151 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 FOXD4L3Q6VB84 417 aaPredicted RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 GAREM2Q75VX8 874 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 DNAJB7Q7Z6W7 309 aaPredicted RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 ITIH5Q86UX2 942 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 HSCBQ8IWL3 235 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 C1orf127Q8N9H9 656 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 FAM200AQ8TCP9 573 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 IRF7Q92985 503 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 HPS3Q969F9 1004 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 DHX58Q96C10 678 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 BORCS6Q96GS4 357 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 LPIN3Q9BQK8 851 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 GPR88Q9GZN0 384 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 TMEM206Q9H813 350 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 TRPV4Q9HBA0 871 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 ZNF334Q9HCZ1 680 aaPredicted RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 KBTBD4Q9NVX7 518 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 SPATA6Q9NWH7 488 aaPredicted RBP13.37□□□□□ -0.27
SMCR2-201ENST00000456090 ASB3Q9Y575 518 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 NCANO14594 1321 aa13.37□□□□□ -0.27
SMCR2-201ENST00000456090 HEPACAM2A8MVW5 462 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 CUTAO60888 179 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 YEATS4O95619 227 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 SP9P0CG40 484 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 PNPLA4P41247 253 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 ASIC1P78348 528 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 STXBP4Q6ZWJ1 553 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 LRRTM3Q86VH5 581 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 GPIHBP1Q8IV16 184 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 MFSD6LQ8IWD5 586 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 MAML2Q8IZL2 1156 aaPredicted RBP13.36□□□□□ -0.27
SMCR2-201ENST00000456090 CACTINQ8WUQ7 758 aaKnown RBP13.36□□□□□ -0.27
SMCR2-201ENST00000456090 DEPDC1BQ8WUY9 529 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 FAM84AQ96KN4 292 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 MTMR12Q9C0I1 747 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 CUEDC2Q9H467 287 aa13.36□□□□□ -0.27
SMCR2-201ENST00000456090 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms