RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 STIM1Q13586 685 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 ANKRD40Q6AI12 368 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 TTI2Q6NXR4 508 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 CCDC149Q6ZUS6 474 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 DPH6Q7L8W6 267 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 OSTM1Q86WC4 334 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 KBTBD7Q8WVZ9 684 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 TMEM209Q96SK2 561 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 PKMYT1Q99640 499 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 TSG101Q99816 390 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 WDR6Q9NNW5 1121 aaKnown RBP15.23■□□□□ 0.03
HDAC4-205ENST00000454542 USTQ9Y2C2 406 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 SNX9Q9Y5X1 595 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 CUL9Q8IWT3 2517 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 DOCK8Q8NF50 2099 aa15.23■□□□□ 0.03
HDAC4-205ENST00000454542 PTPRDP23468 1912 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 CETN3O15182 167 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 HUS1O60921 280 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 SEC24AO95486 1093 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 OR4Q2P0C623 313 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 VAMP7P51809 220 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 CAMK4Q16566 473 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 SOWAHAQ2M3V2 549 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 PPM1LQ5SGD2 360 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 ATAT1Q5SQI0 421 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 ISM2Q6H9L7 571 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 RNF19BQ6ZMZ0 732 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 METTL23Q86XA0 190 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 ADGRF2Q8IZF7 708 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 GJD3Q8N144 294 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 GPT2Q8TD30 523 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 SMG7Q92540 1137 aaKnown RBP15.22■□□□□ 0.03
HDAC4-205ENST00000454542 DUSP9Q99956 384 aaKnown RBP15.22■□□□□ 0.03
HDAC4-205ENST00000454542 CRISPLD1Q9H336 500 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 HSFX1Q9UBD0 423 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 INSL5Q9Y5Q6 135 aa15.22■□□□□ 0.03
HDAC4-205ENST00000454542 BDP1A6H8Y1 2624 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 TNFRSF10AO00220 468 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 BIN1O00499 593 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 TACC1O75410 805 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 FAM163BP0C2L3 166 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 TRIM49P0CI25 452 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 TRIM49CP0CI26 452 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 EPB41P11171 864 aaKnown RBP15.21■□□□□ 0.03
HDAC4-205ENST00000454542 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
HDAC4-205ENST00000454542 MYL6P60660 151 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 PPP3CAQ08209 521 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 ADCY1Q08828 1119 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 NCOA4Q13772 614 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 RBM43Q6ZSC3 357 aaKnown RBP15.21■□□□□ 0.03
HDAC4-205ENST00000454542 SV2AQ7L0J3 742 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 SYAP1Q96A49 352 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-205ENST00000454542 CEP63Q96MT8 703 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 NUP62CLQ9H1M0 184 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 AVENQ9NQS1 362 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-205ENST00000454542 CTNND2Q9UQB3 1225 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 YIPF1Q9Y548 306 aa15.21■□□□□ 0.03
HDAC4-205ENST00000454542 C2CD4DB7Z1M9 353 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
HDAC4-205ENST00000454542 KRT13P13646 458 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 GTF2H1P32780 548 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 LHX1P48742 406 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 ARPP19P56211 112 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 SMARCB1Q12824 385 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 PAK1Q13153 545 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 BIRC3Q13489 604 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 ZNF699Q32M78 642 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 INTS6LQ5JSJ4 861 aaKnown RBP15.2■□□□□ 0.02
HDAC4-205ENST00000454542 THEM5Q8N1Q8 247 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 C2orf15Q8WU43 125 aaKnown RBP15.2■□□□□ 0.02
HDAC4-205ENST00000454542 NELFBQ8WX92 580 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 ACBD6Q9BR61 282 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 CYP4F11Q9HBI6 524 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 TMEM8AQ9HCN3 771 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 DDX43Q9NXZ2 648 aaKnown RBP15.2■□□□□ 0.02
HDAC4-205ENST00000454542 R3HCC1Q9Y3T6 440 aaKnown RBP15.2■□□□□ 0.02
HDAC4-205ENST00000454542 NR2E1Q9Y466 385 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 NME7Q9Y5B8 376 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 DOCK6Q96HP0 2047 aa15.2■□□□□ 0.02
HDAC4-205ENST00000454542 BICDL2A1A5D9 508 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 DLL1O00548 723 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 CCL16O15467 120 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 N4BP1O75113 896 aaKnown RBP15.19■□□□□ 0.02
HDAC4-205ENST00000454542 XYLBO75191 536 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 MYL7Q01449 175 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 TRPC3Q13507 836 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 KLHL10Q6JEL2 608 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 LRRTM3Q86VH5 581 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 ZDHHC14Q8IZN3 488 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 TTC9BQ8N6N2 239 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 TAF4BQ92750 862 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 PGLYRP2Q96PD5 576 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 MED15Q96RN5 788 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 DNAJC25Q9H1X3 360 aa15.19■□□□□ 0.02
HDAC4-205ENST00000454542 GOLGA6L22H0YM25 854 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 PRRG1O14668 218 aa15.18■□□□□ 0.02
HDAC4-205ENST00000454542 HCRTO43612 131 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms