RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 LACTBP83111 547 aaPredicted RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 PPFIA1Q13136 1202 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 ZNF211Q13398 564 aaPredicted RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 ORC1Q13415 861 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 TNFAIP8L3Q5GJ75 292 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 PAQR9Q6ZVX9 377 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 RHOT2Q8IXI1 618 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 RNPC3Q96LT9 517 aaKnown RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 PPP1R10Q96QC0 940 aaKnown RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 PEBP4Q96S96 227 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 PKMYT1Q99640 499 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 WDR83Q9BRX9 315 aaKnown RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 NIF3L1Q9GZT8 377 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 RNF14Q9UBS8 474 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 GTF2IRD1Q9UHL9 959 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 C2CD2Q9Y426 696 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 DENND4CQ5VZ89 1909 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 MAGEB2O15479 319 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 ENDOD1O94919 500 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 CCND3P30281 292 aaPredicted RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 ZNF157P51786 506 aaPredicted RBP7.03□□□□□ -1.28
USP46-202ENST00000451218 IGBP1P78318 339 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 MBTPS1Q14703 1052 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 TTMPQ5BVD1 217 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 TMEM270Q6UE05 265 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 DAAM2Q86T65 1068 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 XYLT1Q86Y38 959 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 C3orf58Q8NDZ4 430 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 PBKQ96KB5 322 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 LHX5Q9H2C1 402 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 PCYOX1Q9UHG3 505 aa7.03□□□□□ -1.28
USP46-202ENST00000451218 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP46-202ENST00000451218 KCNK3O14649 394 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 RARAP10276 462 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 CACNB2Q08289 660 aaPredicted RBP7.02□□□□□ -1.28
USP46-202ENST00000451218 TMEM62Q0P6H9 643 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 NAA35Q5VZE5 725 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 TTC30AQ86WT1 665 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 DDX42Q86XP3 938 aaKnown RBP eCLIP7.02□□□□□ -1.28
USP46-202ENST00000451218 RIN2Q8WYP3 895 aaPredicted RBP7.02□□□□□ -1.28
USP46-202ENST00000451218 C18orf8Q96DM3 657 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 ZMYND15Q9H091 742 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 VIPAS39Q9H9C1 493 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 RNF186Q9NXI6 227 aa7.02□□□□□ -1.28
USP46-202ENST00000451218 CA12O43570 354 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 PSEN2P49810 448 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 DSC3Q14574 896 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 SOWAHAQ2M3V2 549 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 TSR1Q2NL82 804 aaKnown RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 MTERF4Q7Z6M4 381 aaKnown RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 PASD1Q8IV76 773 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 EIF1ADQ8N9N8 165 aaKnown RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 GLIS1Q8NBF1 620 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 MNS1Q8NEH6 495 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 JOSD2Q8TAC2 188 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 LINC01599Q8WXQ3 324 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 BICD1Q96G01 975 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 VCPIP1Q96JH7 1222 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 ALS2CR12Q96Q35 445 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 MAP7D2Q96T17 732 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 RTP3Q9BQQ7 232 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 MRPL45Q9BRJ2 306 aaKnown RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 DDX47Q9H0S4 455 aaKnown RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 UVRAGQ9P2Y5 699 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 ANAPC1Q9H1A4 1944 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 I6L893 689 aaPredicted RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 SART1O43290 800 aaKnown RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 ITGB3P05106 788 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 KCNE1P15382 129 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 CST5P28325 142 aaPredicted RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 GNA15P30679 374 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 PDE6CP51160 858 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 OSTNP61366 133 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 ATP13A4Q4VNC1 1196 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 EMC10Q5UCC4 262 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 LHX8Q68G74 356 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 THNSL1Q8IYQ7 743 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 SLC43A3Q8NBI5 491 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 C1orf131Q8NDD1 294 aaKnown RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 MCRS1Q96EZ8 462 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 OSMRQ99650 979 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 DPEP3Q9H4B8 488 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 ASB7Q9H672 318 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 CACNG4Q9UBN1 327 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 MAP3K7O43318 606 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 AOC2O75106 756 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 TNNI1P19237 187 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 TNFAIP3P21580 790 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 MAN1A1P33908 653 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 PTPN7P35236 360 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 AP3M2P53677 418 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 PRKCZQ05513 592 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 GLE1Q53GS7 698 aaKnown RBP7.02□□□□□ -1.29
USP46-202ENST00000451218 SERINC5Q86VE9 423 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 FAM71BQ8TC56 605 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 DNAJB3Q8WWF6 145 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 MIOSQ9NXC5 875 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 KCNG1Q9UIX4 513 aa7.02□□□□□ -1.29
USP46-202ENST00000451218 INPPL1O15357 1258 aa7.01□□□□□ -1.29
USP46-202ENST00000451218 TTI1O43156 1089 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms