RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ZNF558Q96NG5 402 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 TWNKQ96RR1 684 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 UBE2OQ9C0C9 1292 aaKnown RBP15.62■□□□□ 0.09
TNF-208ENST00000449264 SNX25Q9H3E2 840 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 HAUS4Q9H6D7 363 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 ARHGAP20Q9P2F6 1191 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 PUF60Q9UHX1 559 aaKnown RBP15.62■□□□□ 0.09
TNF-208ENST00000449264 BARX2Q9UMQ3 279 aaPredicted RBP15.62■□□□□ 0.09
TNF-208ENST00000449264 INSL6Q9Y581 213 aa15.62■□□□□ 0.09
TNF-208ENST00000449264 TACC1O75410 805 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 LAG3P18627 525 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 GNA15P30679 374 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 ZNF132P52740 706 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 RASIP1Q5U651 963 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 TAF3Q5VWG9 929 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 KCNT2Q6UVM3 1135 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 OSTM1Q86WC4 334 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 FIBCD1Q8N539 461 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 BCL7CQ8WUZ0 217 aaPredicted RBP15.61■□□□□ 0.09
TNF-208ENST00000449264 SUSD3Q96L08 255 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 DEF6Q9H4E7 631 aa15.61■□□□□ 0.09
TNF-208ENST00000449264 SF3B1O75533 1304 aaKnown RBP eCLIP15.61■□□□□ 0.09
TNF-208ENST00000449264 LCHNA4D1U4 455 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 A8MXQ7 604 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 M0QZQ0 153 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 TRAPPC3O43617 180 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 CD19P15391 556 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 FECHP22830 423 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 PAX3P23760 479 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 EIF4A3P38919 411 aaKnown RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 PRKCIP41743 596 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 RABGGTBP53611 331 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 PTK2Q05397 1052 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 FUT10Q6P4F1 479 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 DPH6Q7L8W6 267 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 TMTC1Q8IUR5 882 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 TTC39CQ8N584 583 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 COLGALT1Q8NBJ5 622 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 EPS8L1Q8TE68 723 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 WHAMMQ8TF30 809 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 SLC20A1Q8WUM9 679 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 RAD9AQ99638 391 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 NT5C1AQ9BXI3 368 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 ELOVL4Q9GZR5 314 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 NHEJ1Q9H9Q4 299 aaPredicted RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 SEPT11Q9NVA2 429 aaKnown RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 CNTN6Q9UQ52 1028 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 NME7Q9Y5B8 376 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.6■□□□□ 0.09
TNF-208ENST00000449264 LAMA3Q16787 3333 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 ARHGEF37A1IGU5 675 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 GRXCR1A8MXD5 290 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 THAP12O43422 761 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 PDGFRBP09619 1106 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 CYP11B1P15538 503 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 WARSP23381 471 aaKnown RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 ACAT1P24752 427 aaKnown RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 TKTP29401 623 aaKnown RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 GNL1P36915 607 aaPredicted RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 RAD23BP54727 409 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 MTF1Q14872 753 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 FAM109BQ6ICB4 259 aaPredicted RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 ZNF571Q7Z3V5 609 aaPredicted RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 LIMS2Q7Z4I7 341 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 NOP9Q86U38 636 aaKnown RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 METTL23Q86XA0 190 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 CEP57Q86XR8 500 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 TMEM86AQ8N2M4 240 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 SLC4A11Q8NBS3 891 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 B3GALT6Q96L58 329 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.6■□□□□ 0.09
TNF-208ENST00000449264 GPR62Q9BZJ7 368 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 DPEP3Q9H4B8 488 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 DDX43Q9NXZ2 648 aaKnown RBP15.6■□□□□ 0.09
TNF-208ENST00000449264 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
TNF-208ENST00000449264 FAM170AA1A519 330 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 BRD2P25440 801 aaKnown RBP15.59■□□□□ 0.09
TNF-208ENST00000449264 LMO2P25791 158 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 SSTR3P32745 418 aaPredicted RBP15.59■□□□□ 0.09
TNF-208ENST00000449264 BPIFB4P59827 614 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 PSMC1P62191 440 aaKnown RBP15.59■□□□□ 0.09
TNF-208ENST00000449264 CDK17Q00537 523 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 FAM171A1Q5VUB5 890 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 ACOT1Q86TX2 421 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 TMEM169Q96HH4 297 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 TMEM176AQ96HP8 235 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 IGSF21Q96ID5 467 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 CCDC42Q96M95 316 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 GDF15Q99988 308 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 FAM124BQ9H5Z6 455 aaPredicted RBP15.59■□□□□ 0.09
TNF-208ENST00000449264 NOCTQ9UK39 431 aaKnown RBP15.59■□□□□ 0.09
TNF-208ENST00000449264 DSEQ9UL01 958 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 STXBP5LQ9Y2K9 1186 aa15.59■□□□□ 0.09
TNF-208ENST00000449264 BZW2Q9Y6E2 419 aaKnown RBP15.59■□□□□ 0.09
TNF-208ENST00000449264 MYH10P35580 1976 aa15.58■□□□□ 0.09
TNF-208ENST00000449264 ARHGAP6O43182 974 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 AKR1B10O60218 316 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 MYOGP15173 224 aa15.58■□□□□ 0.08
TNF-208ENST00000449264 YWHAHQ04917 246 aaPredicted RBP15.58■□□□□ 0.08
TNF-208ENST00000449264 OVOS1Q6IE37 1185 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms