RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SF3B1O75533 1304 aaKnown RBP eCLIP15.01□□□□□ -0.015e-8■■■■■ 37.4
SHMT2-203ENST00000449049 GBF1Q92538 1859 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 LCHNA4D1U4 455 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 GABRDO14764 452 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 CCDC172P0C7W6 258 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 USP8P40818 1118 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 PRKCIP41743 596 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 CDK17Q00537 523 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 ELAVL2Q12926 359 aaKnown RBP15.01□□□□□ -0.01
SHMT2-203ENST00000449049 TSR1Q2NL82 804 aaKnown RBP15.01□□□□□ -0.01
SHMT2-203ENST00000449049 WSCD1Q658N2 575 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 HGSNATQ68CP4 663 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 FAM109BQ6ICB4 259 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-203ENST00000449049 FUT10Q6P4F1 479 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 UNC93AQ86WB7 457 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 LRRC8AQ8IWT6 810 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 RNF168Q8IYW5 571 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-203ENST00000449049 AAASQ9NRG9 546 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 HMGXB4Q9UGU5 601 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 NME7Q9Y5B8 376 aa15.01□□□□□ -0.01
SHMT2-203ENST00000449049 SYN3O14994 580 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 CYP26A1O43174 497 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 NDST1P52848 882 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 RABGGTBP53611 331 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 OSTM1Q86WC4 334 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 TMEM139Q8IV31 216 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 TWNKQ96RR1 684 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 GPR62Q9BZJ7 368 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 ZNHIT6Q9NWK9 470 aaKnown RBP15□□□□□ -0.01
SHMT2-203ENST00000449049 SPG21Q9NZD8 308 aa15□□□□□ -0.01
SHMT2-203ENST00000449049 GRXCR1A8MXD5 290 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 RAD23BP54727 409 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 ARID5AQ03989 594 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 GPIHBP1Q8IV16 184 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 OR6B3Q8NGW1 331 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 ELOVL4Q9GZR5 314 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 SNX25Q9H3E2 840 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 STXBP5LQ9Y2K9 1186 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 PCDHA11Q9Y5I1 949 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 TIMM13Q9Y5L4 95 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-203ENST00000449049 LINC01553A4QN01 128 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 SERPING1P05155 500 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 PAEPP09466 180 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 FGFR3P22607 806 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 TKTP29401 623 aaKnown RBP14.99□□□□□ -0.01
SHMT2-203ENST00000449049 PPM1AP35813 382 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 LHX1P48742 406 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 BPIFB4P59827 614 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-203ENST00000449049 SLC47A2Q86VL8 602 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 METTL23Q86XA0 190 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 SLC4A11Q8NBS3 891 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 TMEM176AQ96HP8 235 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 VN1R3Q9BXE9 311 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 NT5C1AQ9BXI3 368 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 ARHGAP20Q9P2F6 1191 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 PCDHB12Q9Y5F1 795 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 BZW2Q9Y6E2 419 aaKnown RBP14.99□□□□□ -0.01
SHMT2-203ENST00000449049 NLRC5Q86WI3 1866 aa14.99□□□□□ -0.01
SHMT2-203ENST00000449049 VWA8A3KMH1 1905 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 CYP11B1P15538 503 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 GNL1P36915 607 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-203ENST00000449049 PTK2Q05397 1052 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 KLHL30Q0D2K2 578 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 FAM171A1Q5VUB5 890 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 CCDC112Q8NEF3 446 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 EPS8L1Q8TE68 723 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 TMEM169Q96HH4 297 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 BAG1Q99933 345 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-203ENST00000449049 RTP3Q9BQQ7 232 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 DDX43Q9NXZ2 648 aaKnown RBP14.98□□□□□ -0.01
SHMT2-203ENST00000449049 RWDD3Q9Y3V2 267 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 A8MXQ7 604 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 HCRTO43612 131 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 OAZ2O95190 189 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 SKILP12757 684 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 LMO2P25791 158 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 CCZ1BP86790 482 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 CCZ1P86791 482 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-203ENST00000449049 OVOS1Q6IE37 1185 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 NOP9Q86U38 636 aaKnown RBP14.98□□□□□ -0.01
SHMT2-203ENST00000449049 CRYBG2Q8N1P7 616 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 CHP1Q99653 195 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 SYT11Q9BT88 431 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 PRO3102Q9H379 93 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 HAUS4Q9H6D7 363 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 ACP6Q9NPH0 428 aa14.98□□□□□ -0.01
SHMT2-203ENST00000449049 NOCTQ9UK39 431 aaKnown RBP14.98□□□□□ -0.01
SHMT2-203ENST00000449049 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-203ENST00000449049 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-203ENST00000449049 CAPN15O75808 1086 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 MYOGP15173 224 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 PDE6CP51160 858 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 PLCB3Q01970 1234 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 YWHAHQ04917 246 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-203ENST00000449049 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-203ENST00000449049 ORC1Q13415 861 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 MRPL58Q14197 206 aaKnown RBP14.97□□□□□ -0.01
SHMT2-203ENST00000449049 CYP26C1Q6V0L0 522 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms