RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ANKRD42Q8N9B4 389 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 PARD3BQ8TEW8 1205 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 KBTBD7Q8WVZ9 684 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 LENG9Q96B70 501 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 LRIG1Q96JA1 1093 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 TNIP3Q96KP6 325 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 PNKPQ96T60 521 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 ADAM2Q99965 735 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZSWIM1Q9BR11 485 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 TINAGL1Q9GZM7 467 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 REXO4Q9GZR2 422 aaKnown RBP5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 SARS2Q9NP81 518 aaKnown RBP5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 NLRC4Q9NPP4 1024 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 AKIP1Q9NQ31 210 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 GPRC5BQ9NZH0 403 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 CTTNBP2NLQ9P2B4 639 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 CPA4Q9UI42 421 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 ANAPC4Q9UJX5 808 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 HS3ST4Q9Y661 456 aa5.43□□□□□ -1.54
HMGB1P48-201ENST00000446155 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 TMEM200CA6NKL6 621 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 GOLIM4O00461 696 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZFPL1O95159 310 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 MYL3P08590 195 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 SPATA31D3P0C874 917 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 EN2P19622 333 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 FDXRP22570 491 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 BMPR1AP36894 532 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZNF135P52742 658 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 CACNB3P54284 484 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 PSMC1P62191 440 aaKnown RBP5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 STK3Q13188 491 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 HABP2Q14520 560 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 RNF220Q5VTB9 566 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 C1orf228Q6PIY5 440 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 SPATA31D4Q6ZUB0 917 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 CCDC149Q6ZUS6 474 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 CFAP52Q8N1V2 620 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 TMEM132CQ8N3T6 1108 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 SLC17A8Q8NDX2 589 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZNF483Q8TF39 744 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 SLC25A43Q8WUT9 341 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 LRTOMTQ8WZ04 291 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 MYEOVQ96EZ4 313 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 PLEKHG4BQ96PX9 1271 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 MED15Q96RN5 788 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 IMPG2Q9BZV3 1241 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 SLAMF7Q9NQ25 335 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 TMEM74BQ9NUR3 256 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 MRPS18AQ9NVS2 196 aaKnown RBP5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 LUZP4Q9P127 313 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 KCNE5Q9UJ90 142 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 LZTS1Q9Y250 596 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 MYRFQ9Y2G1 1151 aa5.42□□□□□ -1.54
HMGB1P48-201ENST00000446155 A0A1W2PPL8 197 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 MATN3O15232 486 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 HALP42357 657 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 TOB1P50616 345 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 AK2P54819 239 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 HSD11B2P80365 405 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 LMOD3Q0VAK6 560 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 FOXD4Q12950 439 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 CHAF1AQ13111 956 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 KRT72Q14CN4 511 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 POLD3Q15054 466 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 KIAA0753Q2KHM9 967 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 XRRA1Q6P2D8 792 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 DARS2Q6PI48 645 aaKnown RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 SRLQ86TD4 932 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 SMAP1Q8IYB5 467 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 FAM186BQ8IYM0 893 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 CPXCR1Q8N123 301 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 KRT78Q8N1N4 520 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 DDX17Q92841 729 aaKnown RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 NACC2Q96BF6 587 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 APIPQ96GX9 242 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 BOD1Q96IK1 185 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 P2RX7Q99572 595 aaKnown RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 GPR20Q99678 358 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 HERPUD2Q9BSE4 406 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 ZNF747Q9BV97 191 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 PIH1D1Q9NWS0 290 aaKnown RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 FZD1Q9UP38 647 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 DMTF1Q9Y222 760 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 CDYLQ9Y232 598 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 USP19O94966 1318 aa5.41□□□□□ -1.54
HMGB1P48-201ENST00000446155 A0A1W2PS29 197 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 CFAP69A5D8W1 941 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 SUN1O94901 812 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 ABHD16AO95870 558 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 KITP10721 976 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 PIM1P11309 404 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 MYF5P13349 255 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 SLC5A1P13866 664 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 TNFRSF1AP19438 455 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 PEX2P28328 305 aa5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 PPM1FP49593 454 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P48-201ENST00000446155 CXADRP78310 365 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms