RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 KCNJ18B7U540 433 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 PRRG1O14668 218 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 TGM5O43548 720 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 ASS1P00966 412 aaKnown RBP15.1■□□□□ 0.01
SSBP3-208ENST00000444533 EEF1GP26641 437 aaKnown RBP15.1■□□□□ 0.01
SSBP3-208ENST00000444533 GTF2F1P35269 517 aaKnown RBP eCLIP15.1■□□□□ 0.01
SSBP3-208ENST00000444533 MCCD1P59942 119 aaPredicted RBP15.1■□□□□ 0.01
SSBP3-208ENST00000444533 YWHAEP62258 255 aaKnown RBP15.1■□□□□ 0.01
SSBP3-208ENST00000444533 NOP14P78316 857 aaKnown RBP15.1■□□□□ 0.01
SSBP3-208ENST00000444533 KCNJ12Q14500 433 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 MAPRE1Q15691 268 aaKnown RBP15.1■□□□□ 0.01
SSBP3-208ENST00000444533 MAN2A1Q16706 1144 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 PUS10Q3MIT2 529 aaKnown RBP15.1■□□□□ 0.01
SSBP3-208ENST00000444533 ZSCAN23Q3MJ62 389 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 C1orf220Q5T0J3 134 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 TMEM184AQ6ZMB5 413 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 C15orf39Q6ZRI6 1047 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 RTL10Q7L3V2 364 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 TTC39CQ8N584 583 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 OR6B3Q8NGW1 331 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 ZNF461Q8TAF7 563 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 TAS1R2Q8TE23 839 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 FAXDC2Q96IV6 333 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 SFXN1Q9H9B4 322 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 MAN1C1Q9NR34 630 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 L1RE1Q9UN81 338 aa15.1■□□□□ 0.01
SSBP3-208ENST00000444533 PMM2O15305 246 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 TACC1O75410 805 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 VNN1O95497 513 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 EPCAMP16422 314 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 GNL1P36915 607 aaPredicted RBP15.09■□□□□ 0.01
SSBP3-208ENST00000444533 ZNF165P49910 485 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 ROR1Q01973 937 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 NFE2Q16621 373 aaPredicted RBP15.09■□□□□ 0.01
SSBP3-208ENST00000444533 SOWAHAQ2M3V2 549 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 CTC1Q2NKJ3 1217 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 UVSSAQ2YD98 709 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 ANKRD54Q6NXT1 300 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 SCARA5Q6ZMJ2 495 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 C11orf57Q6ZUT1 292 aaPredicted RBP15.09■□□□□ 0.01
SSBP3-208ENST00000444533 ELMOD1Q8N336 334 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 KREMEN2Q8NCW0 462 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 C2orf15Q8WU43 125 aaKnown RBP15.09■□□□□ 0.01
SSBP3-208ENST00000444533 SLC22A17Q8WUG5 538 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 TNIP3Q96KP6 325 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 BPIFA3Q9BQP9 254 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 ACBD6Q9BR61 282 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 TUBGCP2Q9BSJ2 902 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 NIF3L1Q9GZT8 377 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 XYLT2Q9H1B5 865 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 CYP3A43Q9HB55 503 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 AFF4Q9UHB7 1163 aaKnown RBP15.09■□□□□ 0.01
SSBP3-208ENST00000444533 CD207Q9UJ71 328 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 BARX2Q9UMQ3 279 aaPredicted RBP15.09■□□□□ 0.01
SSBP3-208ENST00000444533 MYO7AQ13402 2215 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 SCN1AP35498 2009 aa15.09■□□□□ 0.01
SSBP3-208ENST00000444533 A8MXQ7 604 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 LINC01565O15544 149 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 ATF2P15336 505 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 WARSP23381 471 aaKnown RBP15.08■□□□□ 0
SSBP3-208ENST00000444533 TBXAS1P24557 533 aaPredicted RBP15.08■□□□□ 0
SSBP3-208ENST00000444533 ITIH3Q06033 890 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 COL19A1Q14993 1142 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 CBWD6Q4V339 395 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 HSP90AA4PQ58FG1 418 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 TCP11X2Q5H9J9 407 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 CBWD3Q5JTY5 395 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 CBWD5Q5RIA9 395 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 PPM1LQ5SGD2 360 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 AOPEPQ8N6M6 819 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 ATXN2LQ8WWM7 1075 aaKnown RBP15.08■□□□□ 0
SSBP3-208ENST00000444533 FAM81BQ96LP2 452 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 RIPOR3Q96MK2 946 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 NT5C1BQ96P26 610 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 PIDD1Q9HB75 910 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 CYP4F11Q9HBI6 524 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.08■□□□□ 01e-11■■■■■ 42.3
SSBP3-208ENST00000444533 ZDHHC7Q9NXF8 308 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 CDH9Q9ULB4 789 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 COQ4Q9Y3A0 265 aa15.08■□□□□ 0
SSBP3-208ENST00000444533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.07■□□□□ 0
SSBP3-208ENST00000444533 GOLGA6L19H0YKK7 550 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 H3BQ06 376 aaPredicted RBP15.07■□□□□ 0
SSBP3-208ENST00000444533 TBC1D4O60343 1298 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 XYLBO75191 536 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 LRG1P02750 347 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 C8AP07357 584 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 SPATA31D3P0C874 917 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 MRPS5P82675 430 aaKnown RBP15.07■□□□□ 0
SSBP3-208ENST00000444533 ADCY1Q08828 1119 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 GPR17Q13304 367 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 PLD1Q13393 1074 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 SLC39A12Q504Y0 691 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 FKBP15Q5T1M5 1219 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 CYP26C1Q6V0L0 522 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 GBP6Q6ZN66 633 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 C4orf50Q6ZRC1 276 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 SPATA31D4Q6ZUB0 917 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 ZCWPW1Q9H0M4 648 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms