RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 INCA1Q0VD86 236 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 IFI16Q16666 785 aaKnown RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 CLEC16AQ2KHT3 1053 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 C1orf53Q5VUE5 145 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 NAA35Q5VZE5 725 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 ZNF598Q86UK7 904 aaKnown RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 RTN4RL1Q86UN2 441 aaPredicted RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 LINC01599Q8WXQ3 324 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 SCLYQ96I15 445 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 PAWRQ96IZ0 340 aaKnown RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 NAPGQ99747 312 aaPredicted RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 THAP2Q9H0W7 228 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 C11orf49Q9H6J7 331 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 MIOSQ9NXC5 875 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 CASTOR2A6NHX0 329 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 RIOK3O14730 519 aaKnown RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 SPTLC1O15269 473 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 MED7O43513 233 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 HUS1O60921 280 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 URI1O94763 535 aaPredicted RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 PARNO95453 639 aaKnown RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 CYP2C18P33260 490 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 CLCNKBP51801 687 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 NDST1P52848 882 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 GRIK3Q13003 919 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 ACAD10Q6JQN1 1059 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 APPL2Q8NEU8 664 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 CPA5Q8WXQ8 436 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 RFFLQ8WZ73 363 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 TSC1Q92574 1164 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 APBB2Q92870 758 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 CYFIP2Q96F07 1278 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 TMEM176AQ96HP8 235 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 TWNKQ96RR1 684 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 MRPL45Q9BRJ2 306 aaKnown RBP10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 NT5C1AQ9BXI3 368 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 ELOVL4Q9GZR5 314 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 TMEM39AQ9NV64 488 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 GDAP2Q9NXN4 497 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 CACNG4Q9UBN1 327 aa10.12□□□□□ -0.79
SMPD4P1-203ENST00000443839 TANC1Q9C0D5 1861 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 TDRD15B5MCY1 1934 aaKnown RBP10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 A0A0A6YYK5 440 aaPredicted RBP10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 PODXLO00592 558 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 ENC1O14682 589 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 CFHP08603 1231 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 UNGP13051 313 aaPredicted RBP10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 RPL9P32969 192 aaKnown RBP10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 GPC5P78333 572 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 GPNMBQ14956 572 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 SOWAHAQ2M3V2 549 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 DPH6Q7L8W6 267 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 SLC4A11Q8NBS3 891 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 OR6B3Q8NGW1 331 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 WHAMMQ8TF30 809 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 TFAP2BQ92481 460 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 ZNF653Q96CK0 615 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 HEXIM2Q96MH2 286 aaKnown RBP10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 WNT8AQ9H1J5 351 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
SMPD4P1-203ENST00000443839 CTIFO43310 598 aaKnown RBP10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 LSM8O95777 96 aaKnown RBP10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 CYP1A1P04798 512 aaPredicted RBP10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 NOMO3P69849 1222 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 FAM189BP81408 668 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 CENPCQ03188 943 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 TUSC3Q13454 348 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 SGO2Q562F6 1265 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 PPP1R2P3Q6NXS1 205 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 NECAB2Q7Z6G3 386 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 DEFB128Q7Z7B8 93 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 RHOT2Q8IXI1 618 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 ABI1Q8IZP0 508 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 SLC35G2Q8TBE7 412 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 URGCPQ8TCY9 931 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 RABGGTAQ92696 567 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 ARHGEF26Q96DR7 871 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 TRIM11Q96F44 468 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 DNAI2Q9GZS0 605 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 SNX25Q9H3E2 840 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 TMEM161AQ9NX61 479 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 CTTNBP2NLQ9P2B4 639 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 TBX21Q9UL17 535 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 JRKLQ9Y4A0 524 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 NCANO14594 1321 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 A8MXQ7 604 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 ENPP3O14638 875 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 ATMINO43313 823 aaPredicted RBP10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 PALMO75781 387 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 B3GAT3O94766 335 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 CLTBP09497 229 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 FGFR1P11362 822 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 VDRP11473 427 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 RNASELQ05823 741 aaKnown RBP10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 UPP1Q16831 310 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 LRRC26Q2I0M4 334 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 NOMO2Q5JPE7 1267 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 CLLU1OSQ5K130 101 aa10.1□□□□□ -0.79
SMPD4P1-203ENST00000443839 FAM43BQ6ZT52 329 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms