RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 DCP1BQ8IZD4 617 aaKnown RBP12.72□□□□□ -0.37
TTC28-203ENST00000442232 C2orf15Q8WU43 125 aaKnown RBP12.72□□□□□ -0.37
TTC28-203ENST00000442232 CACTINQ8WUQ7 758 aaKnown RBP12.72□□□□□ -0.37
TTC28-203ENST00000442232 ATRIPQ8WXE1 791 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 PSMG2Q969U7 264 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 CLIC6Q96NY7 704 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 FAM213AQ9BRX8 229 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 IER2Q9BTL4 223 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 ATXN3LQ9H3M9 355 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 MTF2Q9Y483 593 aaPredicted RBP12.72□□□□□ -0.37
TTC28-203ENST00000442232 PCDHGA2Q9Y5H1 932 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 STYXL1Q9Y6J8 313 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 PIAS3Q9Y6X2 628 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
TTC28-203ENST00000442232 SPTBN4Q9H254 2564 aa12.72□□□□□ -0.37
TTC28-203ENST00000442232 COL4A2P08572 1712 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 MYMKA6NI61 221 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 HEPACAM2A8MVW5 462 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 VNN2O95498 520 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 CDC25CP30307 473 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 KPNA1P52294 538 aaPredicted RBP12.71□□□□□ -0.37
TTC28-203ENST00000442232 TFAMQ00059 246 aaKnown RBP12.71□□□□□ -0.37
TTC28-203ENST00000442232 TSPY1Q01534 308 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 FAM173BQ6P4H8 233 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 C1orf228Q6PIY5 440 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 TMC8Q8IU68 726 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 ATAD1Q8NBU5 361 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 SPPL2BQ8TCT7 592 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 FAM3CQ92520 227 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 SECISBP2LQ93073 1101 aaKnown RBP12.71□□□□□ -0.37
TTC28-203ENST00000442232 CLDN23Q96B33 292 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 MSANTD3Q96H12 275 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 ZSWIM3Q96MP5 696 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 DNAJC25Q9H1X3 360 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 TMEM206Q9H813 350 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 ZNF334Q9HCZ1 680 aaPredicted RBP12.71□□□□□ -0.37
TTC28-203ENST00000442232 TRPV5Q9NQA5 729 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 OLFML3Q9NRN5 406 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 PANK4Q9NVE7 773 aa12.71□□□□□ -0.37
TTC28-203ENST00000442232 RBAKQ9NYW8 714 aaPredicted RBP12.71□□□□□ -0.37
TTC28-203ENST00000442232 GVINP1Q7Z2Y8 2422 aa12.71□□□□□ -0.38
TTC28-203ENST00000442232 VPS13AQ96RL7 3174 aa12.71□□□□□ -0.38
TTC28-203ENST00000442232 CFAP54Q96N23 3096 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 KPNA7A9QM74 516 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 K7ELQ4 463 aaPredicted RBP12.7□□□□□ -0.38
TTC28-203ENST00000442232 STX6O43752 255 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 HUS1O60921 280 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 MOSPD3O75425 235 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 SOAT2O75908 522 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 TMEM191BP0C7N4 346 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 GARTP22102 1010 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 GABRR2P28476 465 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 ID4P47928 161 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 FOXK2Q01167 660 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 LRRC32Q14392 662 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 SLC39A14Q15043 492 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 GPR158Q5T848 1215 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 DNAJB7Q7Z6W7 309 aaPredicted RBP12.7□□□□□ -0.38
TTC28-203ENST00000442232 BRSK2Q8IWQ3 736 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 EFCAB13Q8IY85 973 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 TTC9BQ8N6N2 239 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 OR10T2Q8NGX3 314 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 RUBCNQ92622 972 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 DNAJC19Q96DA6 116 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 SAAL1Q96ER3 474 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
TTC28-203ENST00000442232 USP28Q96RU2 1077 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 TMEM209Q96SK2 561 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 PANK2Q9BZ23 570 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 CRISPLD1Q9H336 500 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 ZSCAN32Q9NX65 697 aa12.7□□□□□ -0.38
TTC28-203ENST00000442232 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
TTC28-203ENST00000442232 MORC2Q9Y6X9 1032 aaPredicted RBP12.7□□□□□ -0.38
TTC28-203ENST00000442232 F5P12259 2224 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
TTC28-203ENST00000442232 KIAA0391O15091 583 aaKnown RBP12.69□□□□□ -0.38
TTC28-203ENST00000442232 CHADO15335 359 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 PPP1R37O75864 691 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 ADSSP30520 456 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 POLR2BP30876 1174 aaKnown RBP12.69□□□□□ -0.38
TTC28-203ENST00000442232 NRLP54845 237 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 MYL7Q01449 175 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 BFSP1Q12934 665 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 ARHGAP29Q52LW3 1261 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 WSCD1Q658N2 575 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 POTEHQ6S545 545 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 PDILTQ8N807 584 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 ANKRD36BP1Q96IX9 119 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 LRRC3Q9BY71 257 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 FAM126AQ9BYI3 521 aaPredicted RBP12.69□□□□□ -0.38
TTC28-203ENST00000442232 TNMDQ9H2S6 317 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 C8orf33Q9H7E9 229 aaPredicted RBP12.69□□□□□ -0.38
TTC28-203ENST00000442232 THG1LQ9NWX6 298 aaKnown RBP12.69□□□□□ -0.38
TTC28-203ENST00000442232 OBP2AQ9NY56 170 aa12.69□□□□□ -0.38
TTC28-203ENST00000442232 NCDNQ9UBB6 729 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms