RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, human

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-208	ENST00000441141	ZFP36	P26651	326 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	NOMO3	P69849	1222 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	RHD	Q02161	417 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	HDAC1	Q13547	482 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	POLD3	Q15054	466 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	LLGL1	Q15334	1064 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	SAFB	Q15424	915 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	KIAA0753	Q2KHM9	967 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	AMOT	Q4VCS5	1084 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	SLC44A4	Q53GD3	710 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	RNF220	Q5VTB9	566 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	TSHZ3	Q63HK5	1081 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	FBXO42	Q6P3S6	717 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	BHLHA9	Q7RTU4	235 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	KIAA0319L	Q8IZA0	1049 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	FAM156A	Q8NDB6	213 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	MOGAT1	Q96PD6	335 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	LRFN3	Q9BTN0	628 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	WDR11	Q9BZH6	1224 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	NUP62CL	Q9H1M0	184 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	ZNF768	Q9H5H4	540 aa	Known RBP	4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	FBXO34	Q9NWN3	711 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	TRPM5	Q9NZQ8	1165 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	CPA4	Q9UI42	421 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	USP15	Q9Y4E8	981 aa	Predicted RBP	4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	PCDHA1	Q9Y5I3	950 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	FPGT-TNNI3K	V9GXZ4	949 aa		4.08	□□□□□ -1.76
VPS8-208	ENST00000441141	TMEM200C	A6NKL6	621 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	AHRR	A9YTQ3	701 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	ISM1	B1AKI9	464 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	MYO1C	O00159	1063 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	SOAT2	O75908	522 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	AGFG2	O95081	481 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	MYB	P10242	640 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	TRIM27	P14373	513 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	ITGB6	P18564	788 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	APOBEC3A	P31941	199 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	ELL	P55199	621 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	RNASE9	P60153	205 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	POU6F2	P78424	691 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	CNN3	Q15417	329 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	AGAP9	Q5VTM2	703 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	PAPD7	Q5XG87	772 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	KSR2	Q6VAB6	950 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	ARHGEF19	Q8IW93	802 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	SLC17A8	Q8NDX2	589 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	OR56A1	Q8NGH5	318 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	OR6B3	Q8NGW1	331 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	FBXO41	Q8TF61	875 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	KBTBD7	Q8WVZ9	684 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	LRTOMT	Q8WZ04	291 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	COQ10A	Q96MF6	247 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	SMO	Q99835	787 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	CNPPD1	Q9BV87	410 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	SARG	Q9BW04	601 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	C1orf43	Q9BWL3	253 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	IMPG2	Q9BZV3	1241 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	GPR35	Q9HC97	309 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	AKIP1	Q9NQ31	210 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	DDX20	Q9UHI6	824 aa	Known RBP	4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	NOX1	Q9Y5S8	564 aa		4.07	□□□□□ -1.76
VPS8-208	ENST00000441141	WNT10B	O00744	389 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	TBC1D4	O60343	1298 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	ERN1	O75460	977 aa	Known RBP	4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	MATN4	O95460	622 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	GPANK1	O95872	356 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	SBK3	P0C264	359 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	HKR1	P10072	659 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	XRCC6	P12956	609 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	PEX2	P28328	305 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	SLC7A1	P30825	629 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	SOX8	P57073	446 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	PSMC1	P62191	440 aa	Known RBP	4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	FAM189B	P81408	668 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	PICALM	Q13492	652 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	COBLL1	Q53SF7	1204 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	PRR16	Q569H4	304 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	ZNF783	Q6ZMS7	281 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	PPP1R3B	Q86XI6	285 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	SYT12	Q8IV01	421 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	MAPKAPK5	Q8IW41	473 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	CCDC146	Q8IYE0	955 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	KLHL11	Q9NVR0	708 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	SYBU	Q9NX95	663 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	KCNE5	Q9UJ90	142 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	OGDHL	Q9ULD0	1010 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	PCDHA6	Q9UN73	950 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	MTO1	Q9Y2Z2	717 aa	Known RBP	4.06	□□□□□ -1.76
VPS8-208	ENST00000441141	PLEKHM1	Q9Y4G2	1056 aa		4.06	□□□□□ -1.76
VPS8-208	ENST00000441141		A0A1B0GTW7	788 aa		4.05	□□□□□ -1.76
VPS8-208	ENST00000441141	ANO9	A1A5B4	782 aa		4.05	□□□□□ -1.76
VPS8-208	ENST00000441141	ZNF785	A8K8V0	405 aa		4.05	□□□□□ -1.76
VPS8-208	ENST00000441141	LEFTY2	O00292	366 aa		4.05	□□□□□ -1.76
VPS8-208	ENST00000441141	NCR1	O76036	304 aa		4.05	□□□□□ -1.76
VPS8-208	ENST00000441141	NDUFA10	O95299	355 aa		4.05	□□□□□ -1.76
VPS8-208	ENST00000441141	C1R	P00736	705 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms