RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CCDC85BQ15834 202 aaPredicted RBP15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 GJB7Q6PEY0 223 aa15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 PLEKHO2Q8TD55 490 aa15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 PARD3BQ8TEW8 1205 aa15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 HASPINQ8TF76 798 aa15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 ATRIPQ8WXE1 791 aa15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 PPM1EQ8WY54 764 aa15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 IGSF21Q96ID5 467 aa15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 RBAKQ9NYW8 714 aaPredicted RBP15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 FAN1Q9Y2M0 1017 aa15.6■□□□□ 0.09
TNFRSF1A-204ENST00000440083 BRWD1Q9NSI6 2320 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 CTAGE9A4FU28 777 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 F8VZ95 297 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 GFPT2O94808 682 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 KIF4AO95239 1232 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 KCNE1P15382 129 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 PPM1AP35813 382 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 PRKCIP41743 596 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 ERVFC1P60507 584 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 GFPT1Q06210 699 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 DRAP1Q14919 205 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 C1orf220Q5T0J3 134 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 SLC35F6Q8N357 371 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 SECISBP2LQ93073 1101 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 MRPL38Q96DV4 380 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 KIF12Q96FN5 646 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 WDR24Q96S15 920 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 NAPGQ99747 312 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 AJAP1Q9UKB5 411 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 STXBP5LQ9Y2K9 1186 aa15.59■□□□□ 0.09
TNFRSF1A-204ENST00000440083 SLU7O95391 586 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 ALDH2P05091 517 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 GTF2F1P35269 517 aaKnown RBP eCLIP15.58■□□□□ 0.081e-6■■■■□ 22.9
TNFRSF1A-204ENST00000440083 MCCD1P59942 119 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PLCB3Q01970 1234 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 SLC18A3Q16572 532 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 KYAT1Q16773 422 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 ARHGAP44Q17R89 818 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 ASTE1Q2TB18 679 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 C10orf76Q5T2E6 689 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PLPP4Q5VZY2 271 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 JADE1Q6IE81 842 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TAS1R1Q7RTX1 841 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 BRSK2Q8IWQ3 736 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 EFCAB13Q8IY85 973 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 FBXL13Q8NEE6 735 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 MAFAQ8NHW3 353 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 AUTS2Q8WXX7 1259 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TMEM169Q96HH4 297 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 B3GALT6Q96L58 329 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 NT5C1BQ96P26 610 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PLEKHA5Q9HAU0 1116 aa15.58■□□□□ 0.08
TNFRSF1A-204ENST00000440083 DYNC1I1O14576 645 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 FSCN2O14926 492 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 ZNF263O14978 683 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TACC1O75410 805 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TNNI1P19237 187 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 POU3F3P20264 500 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PIK3CAP42336 1068 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 CLCNKBP51801 687 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 MFAP3P55082 362 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TUBB2AQ13885 445 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 SURF1Q15526 300 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PTPROQ16827 1216 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 CD300LGQ6UXG3 332 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 ADGRD2Q7Z7M1 963 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 C3orf58Q8NDZ4 430 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 MNS1Q8NEH6 495 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 FAM81BQ96LP2 452 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 ALS2CR12Q96Q35 445 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 CGRRF1Q99675 332 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TCF25Q9BQ70 676 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TUBB2BQ9BVA1 445 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 IRX2Q9BZI1 471 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 LMAN2LQ9H0V9 348 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 L2HGDHQ9H9P8 463 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 UBE2TQ9NPD8 197 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TLR9Q9NR96 1032 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TRIM10Q9UDY6 481 aa15.57■□□□□ 0.08
TNFRSF1A-204ENST00000440083 MACROD2A1Z1Q3 448 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 I3L4J1 428 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PODXLO00592 558 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PPEF2O14830 753 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 LRRN2O75325 713 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 CLSTN1O94985 981 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 KRT17Q04695 432 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 UBE3AQ05086 875 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PTK2Q05397 1052 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 BIRC3Q13489 604 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TMEM132DQ14C87 1099 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 ZBTB6Q15916 424 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 TCEAL5Q5H9L2 206 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 LMBRD2Q68DH5 695 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 SCARA3Q6AZY7 606 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PHLDB3Q6NSJ2 640 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 IRF2BP2Q7Z5L9 587 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 ARHGEF19Q8IW93 802 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 VPS52Q8N1B4 723 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 PPM1KQ8N3J5 372 aa15.56■□□□□ 0.08
TNFRSF1A-204ENST00000440083 LMO3Q8TAP4 145 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms