RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 POTEJP0CG39 1038 aa16.25■□□□□ 0.19
APP-208ENST00000439274 KRT15P19012 456 aa16.25■□□□□ 0.19
APP-208ENST00000439274 RPA3P35244 121 aaPredicted RBP16.25■□□□□ 0.19
APP-208ENST00000439274 EMC2Q15006 297 aa16.25■□□□□ 0.19
APP-208ENST00000439274 TRIM72Q6ZMU5 477 aa16.25■□□□□ 0.19
APP-208ENST00000439274 ERICH1Q86X53 443 aa16.25■□□□□ 0.19
APP-208ENST00000439274 ZBED8Q8IZ13 594 aa16.25■□□□□ 0.19
APP-208ENST00000439274 ZNF526Q8TF50 670 aaPredicted RBP16.25■□□□□ 0.19
APP-208ENST00000439274 C10orf88Q9H8K7 445 aa16.25■□□□□ 0.19
APP-208ENST00000439274 ETNK1Q9HBU6 452 aa16.25■□□□□ 0.19
APP-208ENST00000439274 C15orf41Q9Y2V0 281 aa16.25■□□□□ 0.19
APP-208ENST00000439274 EGFRP00533 1210 aa16.24■□□□□ 0.19
APP-208ENST00000439274 POLGP54098 1239 aaPredicted RBP16.24■□□□□ 0.19
APP-208ENST00000439274 RTP1P59025 263 aa16.24■□□□□ 0.19
APP-208ENST00000439274 GAD2Q05329 585 aa16.24■□□□□ 0.19
APP-208ENST00000439274 C1QBPQ07021 282 aaKnown RBP16.24■□□□□ 0.19
APP-208ENST00000439274 R3HDM1Q15032 1099 aaKnown RBP16.24■□□□□ 0.19
APP-208ENST00000439274 ZNF394Q53GI3 561 aa16.24■□□□□ 0.19
APP-208ENST00000439274 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
APP-208ENST00000439274 ANKMY2Q8IV38 441 aa16.24■□□□□ 0.19
APP-208ENST00000439274 ALLCQ8N6M5 410 aa16.24■□□□□ 0.19
APP-208ENST00000439274 DENND1AQ8TEH3 1009 aa16.24■□□□□ 0.19
APP-208ENST00000439274 ZNF606Q8WXB4 792 aa16.24■□□□□ 0.19
APP-208ENST00000439274 TMEM121Q9BTD3 319 aa16.24■□□□□ 0.19
APP-208ENST00000439274 MSTO1Q9BUK6 570 aa16.24■□□□□ 0.19
APP-208ENST00000439274 SLC9A2Q9UBY0 812 aa16.24■□□□□ 0.19
APP-208ENST00000439274 IP6K2Q9UHH9 426 aa16.24■□□□□ 0.19
APP-208ENST00000439274 PHTF1Q9UMS5 762 aa16.24■□□□□ 0.19
APP-208ENST00000439274 FER1L6Q2WGJ9 1857 aa16.24■□□□□ 0.19
APP-208ENST00000439274 A0A1W2PPM1 405 aa16.24■□□□□ 0.19
APP-208ENST00000439274 IFNB1P01574 187 aa16.24■□□□□ 0.19
APP-208ENST00000439274 CCNB1P14635 433 aa16.24■□□□□ 0.19
APP-208ENST00000439274 MTM1Q13496 603 aa16.24■□□□□ 0.19
APP-208ENST00000439274 RCOR2Q8IZ40 523 aa16.24■□□□□ 0.19
APP-208ENST00000439274 RTKN2Q8IZC4 609 aa16.24■□□□□ 0.19
APP-208ENST00000439274 UTP4Q969X6 686 aaKnown RBP16.24■□□□□ 0.19
APP-208ENST00000439274 ERP27Q96DN0 273 aa16.24■□□□□ 0.19
APP-208ENST00000439274 VCPIP1Q96JH7 1222 aa16.24■□□□□ 0.19
APP-208ENST00000439274 TMEM237Q96Q45 408 aa16.24■□□□□ 0.19
APP-208ENST00000439274 SAE1Q9UBE0 346 aaPredicted RBP16.24■□□□□ 0.19
APP-208ENST00000439274 FBXO40Q9UH90 709 aa16.24■□□□□ 0.19
APP-208ENST00000439274 TMEM191CA6NGB0 347 aa16.23■□□□□ 0.19
APP-208ENST00000439274 DIAPH2O60879 1101 aa16.23■□□□□ 0.19
APP-208ENST00000439274 UNC5CO95185 931 aa16.23■□□□□ 0.19
APP-208ENST00000439274 TMEM191BP0C7N4 346 aa16.23■□□□□ 0.19
APP-208ENST00000439274 MMP8P22894 467 aa16.23■□□□□ 0.19
APP-208ENST00000439274 ENPEPQ07075 957 aa16.23■□□□□ 0.19
APP-208ENST00000439274 ACVR2BQ13705 512 aa16.23■□□□□ 0.19
APP-208ENST00000439274 SLC1A5Q15758 541 aa16.23■□□□□ 0.19
APP-208ENST00000439274 WDR72Q3MJ13 1102 aa16.23■□□□□ 0.19
APP-208ENST00000439274 SNRNP48Q6IEG0 339 aaKnown RBP16.23■□□□□ 0.19
APP-208ENST00000439274 ABHD15Q6UXT9 468 aa16.23■□□□□ 0.19
APP-208ENST00000439274 SPOCD1Q6ZMY3 1216 aa16.23■□□□□ 0.19
APP-208ENST00000439274 RIBC1Q8N443 379 aaPredicted RBP16.23■□□□□ 0.19
APP-208ENST00000439274 TAB3Q8N5C8 712 aaPredicted RBP16.23■□□□□ 0.19
APP-208ENST00000439274 CCHCR1Q8TD31 782 aa16.23■□□□□ 0.19
APP-208ENST00000439274 CHKBQ9Y259 395 aa16.23■□□□□ 0.19
APP-208ENST00000439274 TJP3O95049 919 aa16.23■□□□□ 0.19
APP-208ENST00000439274 ATP4AP20648 1035 aa16.23■□□□□ 0.19
APP-208ENST00000439274 GLRA2P23416 452 aa16.23■□□□□ 0.19
APP-208ENST00000439274 BRD2P25440 801 aaKnown RBP16.23■□□□□ 0.19
APP-208ENST00000439274 TARSP26639 723 aaKnown RBP16.23■□□□□ 0.19
APP-208ENST00000439274 CETN2P41208 172 aa16.23■□□□□ 0.19
APP-208ENST00000439274 PLCB3Q01970 1234 aa16.23■□□□□ 0.19
APP-208ENST00000439274 NCOA4Q13772 614 aa16.23■□□□□ 0.19
APP-208ENST00000439274 EFTUD2Q15029 972 aaKnown RBP eCLIP16.23■□□□□ 0.19
APP-208ENST00000439274 MTMR14Q8NCE2 650 aa16.23■□□□□ 0.19
APP-208ENST00000439274 GRAMD1AQ96CP6 724 aa16.23■□□□□ 0.19
APP-208ENST00000439274 ZBED3Q96IU2 234 aaPredicted RBP16.23■□□□□ 0.19
APP-208ENST00000439274 RBM41Q96IZ5 413 aaKnown RBP16.23■□□□□ 0.19
APP-208ENST00000439274 TEPSINQ96N21 525 aa16.23■□□□□ 0.19
APP-208ENST00000439274 SGIP1Q9BQI5 828 aa16.23■□□□□ 0.19
APP-208ENST00000439274 NOP53Q9NZM5 478 aaKnown RBP16.23■□□□□ 0.19
APP-208ENST00000439274 STYXL1Q9Y6J8 313 aa16.23■□□□□ 0.19
APP-208ENST00000439274 LRRD1A4D1F6 860 aa16.22■□□□□ 0.19
APP-208ENST00000439274 TTLL13PA6NNM8 815 aa16.22■□□□□ 0.19
APP-208ENST00000439274 NFASCO94856 1347 aa16.22■□□□□ 0.19
APP-208ENST00000439274 CST3P01034 146 aaPredicted RBP16.22■□□□□ 0.19
APP-208ENST00000439274 FGFR1P11362 822 aa16.22■□□□□ 0.19
APP-208ENST00000439274 CA4P22748 312 aa16.22■□□□□ 0.19
APP-208ENST00000439274 DYNLT1P63172 113 aa16.22■□□□□ 0.19
APP-208ENST00000439274 SP2Q02086 613 aa16.22■□□□□ 0.19
APP-208ENST00000439274 LMNB2Q03252 620 aa16.22■□□□□ 0.19
APP-208ENST00000439274 PDIA2Q13087 525 aaKnown RBP16.22■□□□□ 0.19
APP-208ENST00000439274 SPARCL1Q14515 664 aa16.22■□□□□ 0.19
APP-208ENST00000439274 SMC6Q96SB8 1091 aa16.22■□□□□ 0.19
APP-208ENST00000439274 CGRRF1Q99675 332 aa16.22■□□□□ 0.19
APP-208ENST00000439274 UTRNP46939 3433 aa16.22■□□□□ 0.19
APP-208ENST00000439274 CNTNAP2Q9UHC6 1331 aa16.22■□□□□ 0.19
APP-208ENST00000439274 K7ERI5 159 aa16.22■□□□□ 0.19
APP-208ENST00000439274 SGK1O00141 431 aa16.22■□□□□ 0.19
APP-208ENST00000439274 CCND1P24385 295 aa16.22■□□□□ 0.19
APP-208ENST00000439274 NAA25Q14CX7 972 aa16.22■□□□□ 0.19
APP-208ENST00000439274 RNASEH2BQ5TBB1 312 aaKnown RBP16.22■□□□□ 0.19
APP-208ENST00000439274 CYP4A22Q5TCH4 519 aa16.22■□□□□ 0.19
APP-208ENST00000439274 DCUN1D2Q6PH85 259 aa16.22■□□□□ 0.19
APP-208ENST00000439274 VSIG1Q86XK7 387 aa16.22■□□□□ 0.19
APP-208ENST00000439274 DEPTORQ8TB45 409 aa16.22■□□□□ 0.19
APP-208ENST00000439274 FBF1Q8TES7 1133 aa16.22■□□□□ 0.19
APP-208ENST00000439274 MAK16Q9BXY0 300 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms