RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ZNF132P52740 706 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 PTK2Q05397 1052 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 SHHQ15465 462 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 KCNT2Q6UVM3 1135 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 CYP26C1Q6V0L0 522 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 COLGALT1Q8NBJ5 622 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 OR6B3Q8NGW1 331 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 KBTBD7Q8WVZ9 684 aa22.1■■□□□ 1.13
CHD3-204ENST00000439235 MRPL45Q9BRJ2 306 aaKnown RBP22.1■■□□□ 1.13
CHD3-204ENST00000439235 SCN1AP35498 2009 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 F8W810 466 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 SYN3O14994 580 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 CYP11A1P05108 521 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 PAEPP09466 180 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 PPM1AP35813 382 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 LHX1P48742 406 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 NDST1P52848 882 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 WSCD1Q658N2 575 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 FUT10Q6P4F1 479 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 WDR59Q6PJI9 974 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 IRF2BP2Q7Z5L9 587 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 TMTC1Q8IUR5 882 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 GPIHBP1Q8IV16 184 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 TRIM44Q96DX7 344 aaPredicted RBP22.09■■□□□ 1.13
CHD3-204ENST00000439235 NT5C1AQ9BXI3 368 aa22.09■■□□□ 1.13
CHD3-204ENST00000439235 A8MXQ7 604 aa22.08■■□□□ 1.13
CHD3-204ENST00000439235 NT5C1B-RDH14C9J2C7 533 aa22.08■■□□□ 1.13
CHD3-204ENST00000439235 I3L4J1 428 aa22.08■■□□□ 1.13
CHD3-204ENST00000439235 GNL1P36915 607 aaPredicted RBP22.08■■□□□ 1.13
CHD3-204ENST00000439235 PBX3P40426 434 aa22.08■■□□□ 1.13
CHD3-204ENST00000439235 SLC39A11Q8N1S5 342 aa22.08■■□□□ 1.13
CHD3-204ENST00000439235 TMEM176AQ96HP8 235 aa22.08■■□□□ 1.13
CHD3-204ENST00000439235 IGSF21Q96ID5 467 aa22.08■■□□□ 1.13
CHD3-204ENST00000439235 PCDHB12Q9Y5F1 795 aa22.08■■□□□ 1.13
CHD3-204ENST00000439235 SSU72P8A0A1W2PR75 194 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 GABRDO14764 452 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 ANXA13P27216 316 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 GNA15P30679 374 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 CLCN1P35523 988 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 RAD23BP54727 409 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 ZNF394Q53GI3 561 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 HGSNATQ68CP4 663 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.07■■□□□ 1.12
CHD3-204ENST00000439235 VPS36Q86VN1 386 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 TMEM139Q8IV31 216 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 EPS8L1Q8TE68 723 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 WHAMMQ8TF30 809 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 TMEM169Q96HH4 297 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 DEF6Q9H4E7 631 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 HAUS4Q9H6D7 363 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 SPG21Q9NZD8 308 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 HMGXB4Q9UGU5 601 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 RWDD3Q9Y3V2 267 aa22.07■■□□□ 1.12
CHD3-204ENST00000439235 SKILP12757 684 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 CYP11B1P15538 503 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 PCSK1P29120 753 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 CCZ1BP86790 482 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 CCZ1P86791 482 aaPredicted RBP22.06■■□□□ 1.12
CHD3-204ENST00000439235 MAPK8IP2Q13387 824 aaPredicted RBP22.06■■□□□ 1.12
CHD3-204ENST00000439235 HS1BP3Q53T59 392 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 FAM171A1Q5VUB5 890 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 OVOS1Q6IE37 1185 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 SLC47A2Q86VL8 602 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 OSTM1Q86WC4 334 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 TMEM173Q86WV6 379 aaPredicted RBP22.06■■□□□ 1.12
CHD3-204ENST00000439235 ZNF677Q86XU0 584 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 THEM5Q8N1Q8 247 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 BCL7CQ8WUZ0 217 aaPredicted RBP22.06■■□□□ 1.12
CHD3-204ENST00000439235 CLP1Q92989 425 aaKnown RBP22.06■■□□□ 1.12
CHD3-204ENST00000439235 TNIP3Q96KP6 325 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 TWNKQ96RR1 684 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 ELOVL4Q9GZR5 314 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 ARHGAP20Q9P2F6 1191 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 STK39Q9UEW8 545 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 KIAA1257Q9ULG3 409 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 STXBP5LQ9Y2K9 1186 aa22.06■■□□□ 1.12
CHD3-204ENST00000439235 TIMM13Q9Y5L4 95 aaPredicted RBP22.06■■□□□ 1.12
CHD3-204ENST00000439235 CD19P15391 556 aa22.05■■□□□ 1.12
CHD3-204ENST00000439235 TKTP29401 623 aaKnown RBP22.05■■□□□ 1.12
CHD3-204ENST00000439235 BMP8BP34820 402 aa22.05■■□□□ 1.12
CHD3-204ENST00000439235 YWHAHQ04917 246 aaPredicted RBP22.05■■□□□ 1.12
CHD3-204ENST00000439235 CCDC170Q8IYT3 715 aa22.05■■□□□ 1.12
CHD3-204ENST00000439235 SLC4A11Q8NBS3 891 aa22.05■■□□□ 1.12
CHD3-204ENST00000439235 CCDC42Q96M95 316 aa22.05■■□□□ 1.12
CHD3-204ENST00000439235 CHP1Q99653 195 aa22.05■■□□□ 1.12
CHD3-204ENST00000439235 GPR62Q9BZJ7 368 aa22.05■■□□□ 1.12
CHD3-204ENST00000439235 NHEJ1Q9H9Q4 299 aaPredicted RBP22.05■■□□□ 1.12
CHD3-204ENST00000439235 DDX43Q9NXZ2 648 aaKnown RBP22.05■■□□□ 1.12
CHD3-204ENST00000439235 PUF60Q9UHX1 559 aaKnown RBP22.05■■□□□ 1.12
CHD3-204ENST00000439235 ARHGAP6O43182 974 aa22.04■■□□□ 1.12
CHD3-204ENST00000439235 THAP12O43422 761 aa22.04■■□□□ 1.12
CHD3-204ENST00000439235 MED7O43513 233 aa22.04■■□□□ 1.12
CHD3-204ENST00000439235 VDRP11473 427 aa22.04■■□□□ 1.12
CHD3-204ENST00000439235 FGFR3P22607 806 aa22.04■■□□□ 1.12
CHD3-204ENST00000439235 CYLC1P35663 651 aaPredicted RBP22.04■■□□□ 1.12
CHD3-204ENST00000439235 EIF4A3P38919 411 aaKnown RBP22.04■■□□□ 1.12
CHD3-204ENST00000439235 RABGGTBP53611 331 aa22.04■■□□□ 1.12
CHD3-204ENST00000439235 NOP9Q86U38 636 aaKnown RBP22.04■■□□□ 1.12
CHD3-204ENST00000439235 KCNF1Q9H3M0 494 aa22.04■■□□□ 1.12
CHD3-204ENST00000439235 NOCTQ9UK39 431 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms