RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 PKP3Q9Y446 797 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 BRD2P25440 801 aaKnown RBP16.38■□□□□ 0.21
NEDD4-202ENST00000435532 SPARCL1Q14515 664 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 SLC18A3Q16572 532 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 TRIM48Q8IWZ4 208 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 TRPM4Q8TD43 1214 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 RIN2Q8WYP3 895 aaPredicted RBP16.38■□□□□ 0.21
NEDD4-202ENST00000435532 ARHGEF26Q96DR7 871 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 CHST12Q9NRB3 414 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 METTL5Q9NRN9 209 aaKnown RBP16.38■□□□□ 0.21
NEDD4-202ENST00000435532 FAM198AQ9UFP1 575 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 ITIH6Q6UXX5 1313 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 TTC36A6NLP5 189 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 ZMYND10O75800 440 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 OXCT1P55809 520 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 CCDC137Q6PK04 289 aaKnown RBP16.38■□□□□ 0.21
NEDD4-202ENST00000435532 NT5DC4Q86YG4 428 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 CSGALNACT1Q8TDX6 532 aa16.38■□□□□ 0.21
NEDD4-202ENST00000435532 PHLPP1O60346 1717 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 IGFBP4P22692 258 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 DNAJB2P25686 324 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 ARSEP51690 589 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 PDAP1Q13442 181 aaKnown RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 GPATCH11Q8N954 259 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 SYF2O95926 243 aaKnown RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 STARD3Q14849 445 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 FSCBQ5H9T9 825 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 FTHL17Q9BXU8 183 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 EML4Q9HC35 981 aaKnown RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 MED1Q15648 1581 aaPredicted RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 NRCAMQ92823 1304 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 ARHGAP10A1A4S6 786 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 CAPN15O75808 1086 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 ASS1P00966 412 aaKnown RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 ACO1P21399 889 aaKnown RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 TMPRSS15P98073 1019 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 GABPB1Q06547 395 aaPredicted RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 IZUMO3Q5VZ72 239 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 RPRD1AQ96P16 312 aaPredicted RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 MTMR12Q9C0I1 747 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 GPRC5CQ9NQ84 441 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 BAG2O95816 211 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 OSBPL9Q96SU4 736 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 YIPF2Q9BWQ6 316 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 TEX33O43247 280 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 FDPSP14324 419 aaKnown RBP16.37■□□□□ 0.21
NEDD4-202ENST00000435532 UNC45BQ8IWX7 931 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 KDM4CQ9H3R0 1056 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 FBXO44Q9H4M3 255 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 OLFML3Q9NRN5 406 aa16.37■□□□□ 0.21
NEDD4-202ENST00000435532 CASTOR2A6NHX0 329 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 SLC7A5Q01650 507 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 FBXO47Q5MNV8 452 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 CES5AQ6NT32 575 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 PDZD8Q8NEN9 1154 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 UROC1Q96N76 676 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 KRT82Q9NSB4 513 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 TRIM33Q9UPN9 1127 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 RGS4P49798 205 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 OVOS1Q6IE37 1185 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 A1CFQ9NQ94 594 aaKnown RBP16.36■□□□□ 0.21
NEDD4-202ENST00000435532 DDIT4Q9NX09 232 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 TLR2O60603 784 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 GRAP2O75791 330 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 LGALS2P05162 132 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 VCLP18206 1134 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 BOLA3Q53S33 107 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 NECAB2Q7Z6G3 386 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 SLC35G2Q8TBE7 412 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 FEZF2Q8TBJ5 459 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 TEX12Q9BXU0 123 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 EFCAB14O75071 495 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
NEDD4-202ENST00000435532 AMHR2Q16671 573 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 KDELC2Q7Z4H8 507 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 CARNMT1Q8N4J0 409 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 VPS9D1Q9Y2B5 631 aa16.36■□□□□ 0.21
NEDD4-202ENST00000435532 COL3A1P02461 1466 aaPredicted RBP16.36■□□□□ 0.21
NEDD4-202ENST00000435532 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 M0QYT0 321 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 SMAPO00193 183 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 CCDC38Q502W7 563 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 CELF3Q5SZQ8 465 aaKnown RBP16.35■□□□□ 0.21
NEDD4-202ENST00000435532 ZBED8Q8IZ13 594 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 KIRREL3Q8IZU9 778 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 MKL1Q969V6 931 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 SKA1Q96BD8 255 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 XPO6Q96QU8 1125 aaKnown RBP16.35■□□□□ 0.21
NEDD4-202ENST00000435532 SNTG2Q9NY99 539 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 AIPL1Q9NZN9 384 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 UMODL1Q5DID0 1318 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 WDR91A4D1P6 747 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 MYBPC2Q14324 1141 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 PCBP1Q15365 356 aaKnown RBP eCLIP16.35■□□□□ 0.21
NEDD4-202ENST00000435532 TIGD7Q6NT04 549 aaPredicted RBP16.35■□□□□ 0.21
NEDD4-202ENST00000435532 TTC17Q96AE7 1141 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 PI4K2AQ9BTU6 479 aa16.35■□□□□ 0.21
NEDD4-202ENST00000435532 MFSD1Q9H3U5 465 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms