RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 LONRF1Q17RB8 773 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 ZNF699Q32M78 642 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 C2CD6Q53TS8 623 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 ZFYVE27Q5T4F4 411 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 LLGL2Q6P1M3 1020 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 MPZL3Q6UWV2 235 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 CCDC13Q8IYE1 715 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 LRRC34Q8IZ02 419 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 GPC2Q8N158 579 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 CCT6BQ92526 530 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.64
CD44-210ENST00000434472 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 PPP1R1BQ9UD71 204 aaPredicted RBP11.02□□□□□ -0.64
CD44-210ENST00000434472 FZD1Q9UP38 647 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 EFR3BQ9Y2G0 817 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 LOC102724159A0A0B4J2E5 919 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 NOP56O00567 594 aaKnown RBP11.02□□□□□ -0.65
CD44-210ENST00000434472 ACKR2O00590 384 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 B4GALT4O60513 344 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 HNRNPH1P31943 449 aaKnown RBP11.02□□□□□ -0.65
CD44-210ENST00000434472 FSTL1Q12841 308 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 VGLL4Q14135 290 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 PWP2Q15269 919 aaKnown RBP11.02□□□□□ -0.65
CD44-210ENST00000434472 LLGL1Q15334 1064 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 HADHQ16836 314 aaKnown RBP11.02□□□□□ -0.65
CD44-210ENST00000434472 TFDP3Q5H9I0 405 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 PPP1R15BQ5SWA1 713 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 UBAP2Q5T6F2 1119 aaKnown RBP11.02□□□□□ -0.65
CD44-210ENST00000434472 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 GADL1Q6ZQY3 521 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 TSHZ1Q6ZSZ6 1077 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 POLNQ7Z5Q5 900 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 PCGF5Q86SE9 256 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 ALLCQ8N6M5 410 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 KAT2BQ92831 832 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 FAM212AQ96EL1 285 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 GPR20Q99678 358 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 MTMR12Q9C0I1 747 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 LHX5Q9H2C1 402 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 TPX2Q9ULW0 747 aaKnown RBP11.02□□□□□ -0.65
CD44-210ENST00000434472 ZNF148Q9UQR1 794 aa11.02□□□□□ -0.65
CD44-210ENST00000434472 hCG_1818297A0A087WSY0 165 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 O00370 1275 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 ABLIM1O14639 778 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 IRF6O14896 467 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 DNAJC8O75937 253 aaPredicted RBP11.01□□□□□ -0.65
CD44-210ENST00000434472 KRT7P08729 469 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 SRGAP2CP0DJJ0 459 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 PROZP22891 400 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 BRD2P25440 801 aaKnown RBP11.01□□□□□ -0.65
CD44-210ENST00000434472 MAGEA4P43358 317 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 VPS41P49754 854 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 VCPP55072 806 aaKnown RBP11.01□□□□□ -0.65
CD44-210ENST00000434472 TNFAIP2Q03169 654 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 MORF4L2Q15014 288 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 P3H1Q32P28 736 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 SEZ6Q53EL9 994 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 CELF3Q5SZQ8 465 aaKnown RBP11.01□□□□□ -0.65
CD44-210ENST00000434472 ATF7IP2Q5U623 682 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 FBXW10Q5XX13 1052 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 MFSD7Q6UXD7 560 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 PPP1R21Q6ZMI0 780 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 ARHGEF18Q6ZSZ5 1173 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 RNF149Q8NC42 400 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 CKAP2Q8WWK9 683 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 NKD2Q969F2 451 aaPredicted RBP11.01□□□□□ -0.65
CD44-210ENST00000434472 MCEEQ96PE7 176 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 OSBPL7Q9BZF2 842 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 PHACTR1Q9C0D0 580 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 FZD8Q9H461 694 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 KCNK9Q9NPC2 374 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 UBN1Q9NPG3 1134 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 NKIRAS1Q9NYS0 192 aa11.01□□□□□ -0.65
CD44-210ENST00000434472 TMEM120BA0PK00 339 aa11□□□□□ -0.65
CD44-210ENST00000434472 PI4K2BG5E9Z4 385 aa11□□□□□ -0.65
CD44-210ENST00000434472 SMAPO00193 183 aa11□□□□□ -0.65
CD44-210ENST00000434472 CXCL11O14625 94 aa11□□□□□ -0.65
CD44-210ENST00000434472 HBP1O60381 514 aa11□□□□□ -0.65
CD44-210ENST00000434472 ITGAVP06756 1048 aa11□□□□□ -0.65
CD44-210ENST00000434472 HOXC6P09630 235 aa11□□□□□ -0.65
CD44-210ENST00000434472 BRAFP15056 766 aa11□□□□□ -0.65
CD44-210ENST00000434472 ATF7P17544 494 aaPredicted RBP11□□□□□ -0.65
CD44-210ENST00000434472 SSTR3P32745 418 aaPredicted RBP11□□□□□ -0.65
CD44-210ENST00000434472 SCTRP47872 440 aa11□□□□□ -0.65
CD44-210ENST00000434472 IREB2P48200 963 aaKnown RBP11□□□□□ -0.65
CD44-210ENST00000434472 GSCP56915 257 aaPredicted RBP11□□□□□ -0.65
CD44-210ENST00000434472 RPL7AP62424 266 aaKnown RBP11□□□□□ -0.65
CD44-210ENST00000434472 LACTBP83111 547 aaPredicted RBP11□□□□□ -0.65
CD44-210ENST00000434472 TFAMQ00059 246 aaKnown RBP11□□□□□ -0.65
CD44-210ENST00000434472 PPARDQ03181 441 aa11□□□□□ -0.65
CD44-210ENST00000434472 POU5F1BQ06416 359 aa11□□□□□ -0.65
CD44-210ENST00000434472 PRKG1Q13976 671 aa11□□□□□ -0.65
CD44-210ENST00000434472 KYAT1Q16773 422 aa11□□□□□ -0.65
CD44-210ENST00000434472 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
CD44-210ENST00000434472 CCDC38Q502W7 563 aa11□□□□□ -0.65
CD44-210ENST00000434472 KAZNQ674X7 775 aa11□□□□□ -0.65
CD44-210ENST00000434472 VSTM1Q6UX27 236 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms