RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 EURLQ9NYK6 297 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 ARL2BPQ9Y2Y0 163 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 POC1B-GALNT4F8VUJ3 575 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 DNALI1O14645 258 aaPredicted RBP12.48□□□□□ -0.41
CD44-209ENST00000433892 SPAG7O75391 227 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 ATG7O95352 703 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 GCAP28676 217 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 FOXN2P32314 431 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 MYL6P60660 151 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 KCNJ2P63252 427 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 GALNTL6Q49A17 601 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 EAPPQ56P03 285 aaPredicted RBP12.48□□□□□ -0.41
CD44-209ENST00000433892 DCAF15Q66K64 600 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 SPOCD1Q6ZMY3 1216 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 FITM2Q8N6M3 262 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 ALLCQ8N6M5 410 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 RMDN2Q96LZ7 410 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 MAGEB18Q96M61 343 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 CFAP57Q96MR6 1250 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 GJA3Q9Y6H8 435 aa12.48□□□□□ -0.41
CD44-209ENST00000433892 LRRD1A4D1F6 860 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 ASS1P00966 412 aaKnown RBP12.47□□□□□ -0.41
CD44-209ENST00000433892 WEE2P0C1S8 567 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 RXRBP28702 533 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 PSMC4P43686 418 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 NCALDP61601 193 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 PLCB3Q01970 1234 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 PREPLQ4J6C6 727 aaPredicted RBP12.47□□□□□ -0.41
CD44-209ENST00000433892 CYP4A22Q5TCH4 519 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 GPAT2Q6NUI2 795 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 PPP1R21Q6ZMI0 780 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 FAM47EQ6ZV65 393 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 ANKRD35Q8N283 1001 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 TBC1D31Q96DN5 1066 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
CD44-209ENST00000433892 TMEM121Q9BTD3 319 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 ADAM33Q9BZ11 813 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 KIF9Q9HAQ2 790 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 CISHQ9NSE2 258 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 PIM2Q9P1W9 311 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 PRKAG3Q9UGI9 489 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.47□□□□□ -0.41
CD44-209ENST00000433892 PHIPQ8WWQ0 1821 aa12.47□□□□□ -0.41
CD44-209ENST00000433892 TCRBV5S1A1TA0A578 114 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 CFAP73A6NFT4 308 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 FAM47DPA6NHR8 397 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 SPDYE16A6NNV3 312 aaPredicted RBP12.46□□□□□ -0.41
CD44-209ENST00000433892 ATP2A1O14983 1001 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 ADCY3O60266 1144 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 IFNB1P01574 187 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 CALB1P05937 261 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 ABHD2P08910 425 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 TAC1P20366 129 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 MAP2K2P36507 400 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 WDR4P57081 412 aaKnown RBP12.46□□□□□ -0.41
CD44-209ENST00000433892 WDR72Q3MJ13 1102 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 PPP1R2P3Q6NXS1 205 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 SCARA5Q6ZMJ2 495 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 WDTC1Q8N5D0 677 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 UBR7Q8N806 425 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 CCHCR1Q8TD31 782 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 PRPF31Q8WWY3 499 aaKnown RBP12.46□□□□□ -0.41
CD44-209ENST00000433892 C12orf42Q96LP6 360 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 PCYT2Q99447 389 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 NIFKQ9BYG3 293 aaKnown RBP12.46□□□□□ -0.41
CD44-209ENST00000433892 SAE1Q9UBE0 346 aaPredicted RBP12.46□□□□□ -0.41
CD44-209ENST00000433892 ZNF112Q9UJU3 913 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 ACTL7BQ9Y614 415 aa12.46□□□□□ -0.41
CD44-209ENST00000433892 GOLGA8SH3BPF8 625 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 GOLGA8MH3BSY2 632 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 GSCP56915 257 aaPredicted RBP12.46□□□□□ -0.42
CD44-209ENST00000433892 COPS2P61201 443 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 IL9RQ01113 521 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 MGAT5Q09328 741 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 BNIP1Q12981 228 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 MKRN3Q13064 507 aaKnown RBP12.46□□□□□ -0.42
CD44-209ENST00000433892 TFDP3Q5H9I0 405 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 WLSQ5T9L3 541 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 DRICH1Q6PGQ1 229 aaPredicted RBP12.46□□□□□ -0.42
CD44-209ENST00000433892 TRABD2AQ86V40 505 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 BRSK2Q8IWQ3 736 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 ZBED8Q8IZ13 594 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 KIF2BQ8N4N8 673 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 TMEM35BQ8NCS4 154 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 MAGEC3Q8TD91 643 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 TFAP2BQ92481 460 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 KCNN1Q92952 543 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 THOC1Q96FV9 657 aaKnown RBP12.46□□□□□ -0.42
CD44-209ENST00000433892 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 PITPNM3Q9BZ71 974 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 FOXP3Q9BZS1 431 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 TMEM134Q9H6X4 195 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 VPS37BQ9H9H4 285 aa12.46□□□□□ -0.42
CD44-209ENST00000433892 hCG_1818297A0A087WSY0 165 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 SGK1O00141 431 aa12.45□□□□□ -0.42
CD44-209ENST00000433892 IGF2BP3O00425 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
CD44-209ENST00000433892 FAM189A1O60320 539 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms