RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CEP72Q9P209 647 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.77□□□□□ -0.532e-12■■■■□ 20.1
CHD4-202ENST00000430771 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.76□□□□□ -0.53
CHD4-202ENST00000430771 OR6C75A6NL08 312 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 TPM1P09493 284 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 CD58P19256 250 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 PBX1P40424 430 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 RAP1GAPP47736 663 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 KLK7P49862 253 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 MRE11P49959 708 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 ZNF75DP51815 510 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 TSPY1Q01534 308 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 RAPGEF1Q13905 1077 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 GSE1Q14687 1217 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 PTPN14Q15678 1187 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 SOWAHAQ2M3V2 549 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 FIGNQ5HY92 759 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 RTP2Q5QGT7 225 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 PHLDB3Q6NSJ2 640 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 RRAGAQ7L523 313 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 CACNA2D4Q7Z3S7 1137 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 TMC7Q7Z402 723 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 LIMS2Q7Z4I7 341 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 UNC93AQ86WB7 457 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 VSTM4Q8IW00 320 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 OR6B3Q8NGW1 331 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 SPPL3Q8TCT6 385 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 KBTBD7Q8WVZ9 684 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 RIN2Q8WYP3 895 aaPredicted RBP11.76□□□□□ -0.53
CHD4-202ENST00000430771 TATDN2Q93075 761 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 PPP2R3CQ969Q6 453 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 SPAG5Q96R06 1193 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 ARID3AQ99856 593 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 MRPL45Q9BRJ2 306 aaKnown RBP11.76□□□□□ -0.53
CHD4-202ENST00000430771 UBE2TQ9NPD8 197 aaPredicted RBP11.76□□□□□ -0.53
CHD4-202ENST00000430771 CHST7Q9NS84 486 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 DDX43Q9NXZ2 648 aaKnown RBP11.76□□□□□ -0.53
CHD4-202ENST00000430771 MTRRQ9UBK8 725 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 DNAJC12Q9UKB3 198 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 BARX2Q9UMQ3 279 aaPredicted RBP11.76□□□□□ -0.53
CHD4-202ENST00000430771 TIMM13Q9Y5L4 95 aaPredicted RBP11.76□□□□□ -0.53
CHD4-202ENST00000430771 FHOD1Q9Y613 1164 aa11.76□□□□□ -0.53
CHD4-202ENST00000430771 LAMA2P24043 3122 aaKnown RBP11.75□□□□□ -0.53
CHD4-202ENST00000430771 A8MXQ7 604 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 GOLGA6L6A8MZA4 724 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 GABRDO14764 452 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 FSCN2O14926 492 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 GRM6O15303 877 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 CILPO75339 1184 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 OAZ2O95190 189 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 IGFBP6P24592 240 aaPredicted RBP11.75□□□□□ -0.53
CHD4-202ENST00000430771 POLR2FP61218 127 aaKnown RBP11.75□□□□□ -0.53
CHD4-202ENST00000430771 CTXN3Q4LDR2 81 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 PLPP4Q5VZY2 271 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 SPECC1LQ69YQ0 1117 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 IQCEQ6IPM2 695 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 ANP32BQ92688 251 aaKnown RBP11.75□□□□□ -0.53
CHD4-202ENST00000430771 ELMO3Q96BJ8 720 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 TNIP3Q96KP6 325 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 B3GALT6Q96L58 329 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 SYT15Q9BQS2 421 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 NT5C1AQ9BXI3 368 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 EMILIN2Q9BXX0 1053 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 SDCBP2Q9H190 292 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 CISHQ9NSE2 258 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 MYO6Q9UM54 1294 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 PCDHB4Q9Y5E5 795 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 BACE2Q9Y5Z0 518 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 IRAK3Q9Y616 596 aa11.75□□□□□ -0.53
CHD4-202ENST00000430771 A0A1W2PQJ5 194 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 F8VZ95 297 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 C2CD2LO14523 706 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 CSPG5O95196 566 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 ADH1AP07327 375 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 WEE2P0C1S8 567 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 KRT5P13647 590 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 CPB1P15086 417 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 CDC25BP30305 580 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 GNL1P36915 607 aaPredicted RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 NDUFV1P49821 464 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 APBA1Q02410 837 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 MRPL58Q14197 206 aaKnown RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 MAPRE1Q15691 268 aaKnown RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 ARHGAP44Q17R89 818 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 INTS6LQ5JSJ4 861 aaKnown RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 KIAA0319Q5VV43 1072 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 GJB7Q6PEY0 223 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 TMEM270Q6UE05 265 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 PRSS55Q6UWB4 352 aaPredicted RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 TMC6Q7Z403 805 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 OSTM1Q86WC4 334 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 DCP1BQ8IZD4 617 aaKnown RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 UBR7Q8N806 425 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 LNX1Q8TBB1 728 aaPredicted RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 MICAL1Q8TDZ2 1067 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 SHC3Q92529 594 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 1272 ms