RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KCNJ18B7U540 433 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 PRRG1O14668 218 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 LRRN2O75325 713 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 WEE2P0C1S8 567 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 GNL1P36915 607 aaPredicted RBP15.6■□□□□ 0.09
SGCE-204ENST00000428696 RAP1GAPP47736 663 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 FMO5P49326 533 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 ZNF165P49910 485 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 CLCN4P51793 760 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 ENPEPQ07075 957 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 DLX2Q07687 328 aaPredicted RBP15.6■□□□□ 0.09
SGCE-204ENST00000428696 MRPL58Q14197 206 aaKnown RBP15.6■□□□□ 0.09
SGCE-204ENST00000428696 KCNJ12Q14500 433 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 ELMSAN1Q6PJG2 1045 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 C15orf39Q6ZRI6 1047 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 IRF2BP1Q8IU81 584 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 TMEM86AQ8N2M4 240 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 TOP6BLQ8N6T0 577 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 VN1R2Q8NFZ6 395 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 SLC22A17Q8WUG5 538 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 CASP10Q92851 521 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 SEMA4DQ92854 862 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 TMEM209Q96SK2 561 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 SMYD3Q9H7B4 428 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 UBE2ZQ9H832 354 aaPredicted RBP15.6■□□□□ 0.09
SGCE-204ENST00000428696 FSD2A1L4K1 749 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 OR6C75A6NL08 312 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 HCRTO43612 131 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 CYP11A1P05108 521 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 LHX1P48742 406 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 TSPY1Q01534 308 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 TFF2Q03403 129 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 RAB33AQ14088 237 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 SLC39A12Q504Y0 691 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 GPR65Q8IYL9 337 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 KREMEN2Q8NCW0 462 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 TAF4BQ92750 862 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 MRPL45Q9BRJ2 306 aaKnown RBP15.6■□□□□ 0.09
SGCE-204ENST00000428696 CYP4F11Q9HBI6 524 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 MAN1C1Q9NR34 630 aa15.6■□□□□ 0.09
SGCE-204ENST00000428696 PDCD11Q14690 1871 aaKnown RBP15.59■□□□□ 0.09
SGCE-204ENST00000428696 SMTNL1A8MU46 457 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 A8MXQ7 604 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 N4BP1O75113 896 aaKnown RBP15.59■□□□□ 0.09
SGCE-204ENST00000428696 GLP2RO95838 553 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 ASS1P00966 412 aaKnown RBP15.59■□□□□ 0.09
SGCE-204ENST00000428696 TPM2P07951 284 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 CD58P19256 250 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 LMO2P25791 158 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 NOP14P78316 857 aaKnown RBP15.59■□□□□ 0.09
SGCE-204ENST00000428696 ROR1Q01973 937 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 ADCY1Q08828 1119 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 TCP11X2Q5H9J9 407 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 RARS2Q5T160 578 aaKnown RBP15.59■□□□□ 0.09
SGCE-204ENST00000428696 LIN9Q5TKA1 542 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 TMC5Q6UXY8 1006 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 RNF19BQ6ZMZ0 732 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 DPH6Q7L8W6 267 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 OSTM1Q86WC4 334 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 ANKRD20A12PQ8NF67 263 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 TATDN2Q93075 761 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 TUBGCP2Q9BSJ2 902 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 CRACR2AQ9BSW2 395 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 TAB2Q9NYJ8 693 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 DPP7Q9UHL4 492 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 COG5Q9UP83 839 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 SLC27A5Q9Y2P5 690 aa15.59■□□□□ 0.09
SGCE-204ENST00000428696 WDR27A2RRH5 827 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 TBX10O75333 385 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 MARSP56192 900 aaKnown RBP15.58■□□□□ 0.08
SGCE-204ENST00000428696 CTC1Q2NKJ3 1217 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 PPM1LQ5SGD2 360 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 SLC8B1Q6J4K2 584 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 ANKRD54Q6NXT1 300 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 OR10T2Q8NGX3 314 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 ZNF461Q8TAF7 563 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 OXCT2Q9BYC2 517 aaPredicted RBP15.58■□□□□ 0.08
SGCE-204ENST00000428696 VPS16Q9H269 839 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 PIDD1Q9HB75 910 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 APOBEC3GQ9HC16 384 aaKnown RBP15.58■□□□□ 0.08
SGCE-204ENST00000428696 CLEC1BQ9P126 229 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 GTF3C4Q9UKN8 822 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 SCN1AP35498 2009 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 COL6A3P12111 3177 aa15.58■□□□□ 0.08
SGCE-204ENST00000428696 REV3LO60673 3130 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.57■□□□□ 0.08
SGCE-204ENST00000428696 CCDC195A0A1B0GUA6 201 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 ATP2C2O75185 946 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 RFPL2O75678 378 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 STAU1O95793 577 aaKnown RBP15.57■□□□□ 0.08
SGCE-204ENST00000428696 PCSK1P29120 753 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 LTBRP36941 435 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 PSMC1P62191 440 aaKnown RBP15.57■□□□□ 0.08
SGCE-204ENST00000428696 DUSP4Q13115 394 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 ORC1Q13415 861 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 MAN2A1Q16706 1144 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 VWA3BQ502W6 1294 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 CES5AQ6NT32 575 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 LILRA6Q6PI73 481 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 DCP1BQ8IZD4 617 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms