RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 IGSF21Q96ID5 467 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 B3GALT6Q96L58 329 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 PPP1R9BQ96SB3 815 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 DNAJC7Q99615 494 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 GPR88Q9GZN0 384 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 MTUS1Q9ULD2 1270 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 BARX2Q9UMQ3 279 aaPredicted RBP8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 TIMM13Q9Y5L4 95 aaPredicted RBP8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 TTC3P53804 2025 aa8.45□□□□□ -1.06
HMGA1P4-201ENST00000428643 A8MXQ7 604 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 M0QZQ0 153 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 SYN3O14994 580 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 TACC1O75410 805 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 FGF18O76093 207 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 CSPG5O95196 566 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 URODP06132 367 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 PDGFRBP09619 1106 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 CCDC172P0C7W6 258 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 ACAT1P24752 427 aaKnown RBP8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 PCSK1P29120 753 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 CA8P35219 290 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 PDE6CP51160 858 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZNF132P52740 706 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 PSMC1P62191 440 aaKnown RBP8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 YWHAHQ04917 246 aaPredicted RBP8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 PTK2Q05397 1052 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 KLHL30Q0D2K2 578 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 RAB30Q15771 203 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 E4F1Q66K89 784 aaPredicted RBP8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 OVOS1Q6IE37 1185 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 ZNF280DQ6N043 979 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 KIAA1841Q6NSI8 718 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 DPH6Q7L8W6 267 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 OSTM1Q86WC4 334 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 TMEM86AQ8N2M4 240 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 UBR7Q8N806 425 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 TC2NQ8N9U0 490 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 SYN2Q92777 582 aaPredicted RBP8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 PANX2Q96RD6 677 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 TWNKQ96RR1 684 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 TTPALQ9BTX7 342 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 HERC2P3Q9BVR0 1158 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 NT5C1AQ9BXI3 368 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 GPR62Q9BZJ7 368 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 ELOVL4Q9GZR5 314 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 FAM124BQ9H5Z6 455 aaPredicted RBP8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 DDX43Q9NXZ2 648 aaKnown RBP8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 MSRAQ9UJ68 235 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 YBX2Q9Y2T7 364 aaKnown RBP8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 RWDD3Q9Y3V2 267 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 PCDHA11Q9Y5I1 949 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 ANK1P16157 1881 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 CITO14578 2027 aa8.44□□□□□ -1.06
HMGA1P4-201ENST00000428643 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 C2CD2LO14523 706 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 THAP12O43422 761 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 HCRTO43612 131 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 ARHGEF15O94989 841 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 CALCAP01258 141 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 CYP11A1P05108 521 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 SERPING1P05155 500 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 PAEPP09466 180 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 LINC00271P0C7V0 271 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 SKILP12757 684 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 TYMPP19971 482 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 FGFR3P22607 806 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 BRD2P25440 801 aaKnown RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 DNAJB2P25686 324 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 GNA15P30679 374 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 BMP8BP34820 402 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 GNL1P36915 607 aaPredicted RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 PBX2P40425 430 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 LHX1P48742 406 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 GLUD2P49448 558 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 RAD23BP54727 409 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 BPIFB4P59827 614 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 TSPY1Q01534 308 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 KRT17Q04695 432 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 CTXN3Q4LDR2 81 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 RTP2Q5QGT7 225 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 VARS2Q5ST30 1063 aaKnown RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 TAF3Q5VWG9 929 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 LIMS2Q7Z4I7 341 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 ACOT1Q86TX2 421 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 SLC47A2Q86VL8 602 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 VPS36Q86VN1 386 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 UNC93AQ86WB7 457 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 THEM5Q8N1Q8 247 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 KLHL23Q8NBE8 558 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 SPATA18Q8TC71 538 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 RIN2Q8WYP3 895 aaPredicted RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 CLP1Q92989 425 aaKnown RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 TMEM176AQ96HP8 235 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 TNIP3Q96KP6 325 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 BAG1Q99933 345 aaPredicted RBP8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 SYT15Q9BQS2 421 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 C17orf80Q9BSJ5 609 aa8.43□□□□□ -1.06
HMGA1P4-201ENST00000428643 C11orf84Q9BUA3 381 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms