RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZMYND8Q9ULU4 1186 aaPredicted RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 NUB1Q9Y5A7 615 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SCINQ9Y6U3 715 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 EDF1O60869 148 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ZC3H11AO75152 810 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 DCTN3O75935 186 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 VNN1O95497 513 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 C4BPAP04003 597 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ACO1P21399 889 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 GARTP22102 1010 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 GCKP35557 465 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SESN3P58005 492 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 PTP4A2Q12974 167 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ACVR2BQ13705 512 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 TFDP1Q14186 410 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF772Q68DY9 489 aaPredicted RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 PLEKHA7Q6IQ23 1121 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 CEP128Q6ZU80 1094 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 TAS1R3Q7RTX0 852 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SAMD3Q8N6K7 520 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 FAM13CQ8NE31 585 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 PYROXD1Q8WU10 500 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF606Q8WXB4 792 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF75CPQ92670 426 aaPredicted RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 RBM41Q96IZ5 413 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 TTC25Q96NG3 672 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SLITRK1Q96PX8 696 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 TARS2Q9BW92 718 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ZWILCHQ9H900 591 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 XPNPEP1Q9NQW7 623 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 BATF3Q9NR55 127 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 PXMP2Q9NR77 195 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 EURLQ9NYK6 297 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SMG5Q9UPR3 1016 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 AGTPBP1Q9UPW5 1226 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 A0A0G2JND7 137 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ENTPD5O75356 428 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ATP5HO75947 161 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 NR3C2P08235 984 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ABHD2P08910 425 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ADRA1DP25100 572 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SKIV2L2P42285 1042 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 YARSP54577 528 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 PDK4Q16654 411 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SMTNL2Q2TAL5 461 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 EAPPQ56P03 285 aaPredicted RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 KCNT1Q5JUK3 1230 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SYCP2LQ5T4T6 812 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 DNAJC24Q6P3W2 148 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 RSBN1LQ6PCB5 846 aaPredicted RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SPOCD1Q6ZMY3 1216 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 NLRP9Q7RTR0 991 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 OTOAQ7RTW8 1153 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 CCDC125Q86Z20 511 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 AGGF1Q8N302 714 aaeCLIP7.94□□□□□ -1.142e-7■□□□□ 9.1
SMARCC1-202ENST00000425518 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 OR5B17Q8NGF7 314 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 TTC8Q8TAM2 541 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ATP6V0A1Q93050 837 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 TCHPQ9BT92 498 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 ZFP69BQ9UJL9 534 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 SIPA1L1O43166 1804 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 ALOX15BO15296 676 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 T-ENOLP0DO92 83 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 BRD2P25440 801 aaKnown RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 ZBTB16Q05516 673 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 CCDC15Q0P6D6 951 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 BBS9Q3SYG4 887 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 CYP4A22Q5TCH4 519 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 CAPRIN2Q6IMN6 1127 aaKnown RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 TRIM72Q6ZMU5 477 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 C3orf62Q6ZUJ4 267 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 PALM2Q8IXS6 379 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 ALLCQ8N6M5 410 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 MCPH1Q8NEM0 835 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 NAF1Q96HR8 494 aaKnown RBP7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 FAXDC2Q96IV6 333 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 MSTO1Q9BUK6 570 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 RIPK3Q9Y572 518 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF541Q9H0D2 1346 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 CFAP69A5D8W1 941 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 K7ERI5 159 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 ZBED4O75132 1171 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 DGAT1O75907 488 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 PDHA1P08559 390 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 FGFR1P11362 822 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 GM2AP17900 193 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 PRKCEQ02156 737 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 MOGSQ13724 837 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 PSMD6Q15008 389 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 HIF1AQ16665 826 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 FYB2Q5VWT5 728 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 C15orf39Q6ZRI6 1047 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 RHPN2Q8IUC4 686 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 RELL1Q8IUW5 271 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 DEPTORQ8TB45 409 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 CNKSR1Q969H4 720 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 FOXP3Q9BZS1 431 aa7.93□□□□□ -1.14
SMARCC1-202ENST00000425518 LRMDAQ9H2I8 198 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms