RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SYN3O14994 580 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 MFAP3LO75121 409 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 CILPO75339 1184 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 CA3P07451 260 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 FGFR3P22607 806 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 TKTP29401 623 aaKnown RBP13.34□□□□□ -0.27
TMEM53-206ENST00000420706 CLCN1P35523 988 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 PPM1AP35813 382 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 USP8P40818 1118 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 LHX1P48742 406 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 PLCB3Q01970 1234 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 SFMBT2Q5VUG0 894 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 TMEM270Q6UE05 265 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 CCDC186Q7Z3E2 898 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 DDX53Q86TM3 631 aaKnown RBP13.34□□□□□ -0.27
TMEM53-206ENST00000420706 UNC93AQ86WB7 457 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 CNGA4Q8IV77 575 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 OR8K1Q8NGG5 319 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 SPATA18Q8TC71 538 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 SYN2Q92777 582 aaPredicted RBP13.34□□□□□ -0.27
TMEM53-206ENST00000420706 TMEM169Q96HH4 297 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 TWNKQ96RR1 684 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 VN1R3Q9BXE9 311 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
TMEM53-206ENST00000420706 AIPL1Q9NZN9 384 aa13.34□□□□□ -0.27
TMEM53-206ENST00000420706 SF3B1O75533 1304 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM53-206ENST00000420706 TNRC18O15417 2968 aaPredicted RBP13.33□□□□□ -0.28
TMEM53-206ENST00000420706 CYP26A1O43174 497 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 FGF18O76093 207 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 GFPT2O94808 682 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 SOD2P04179 222 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 RB1P06400 928 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 KRT5P13647 590 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 LMO2P25791 158 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 HNRNPH3P31942 346 aaKnown RBP13.33□□□□□ -0.28
TMEM53-206ENST00000420706 ZNF132P52740 706 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 NDST1P52848 882 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 RAD23BP54727 409 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.28
TMEM53-206ENST00000420706 RAB30Q15771 203 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 USP41Q3LFD5 358 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 E4F1Q66K89 784 aaPredicted RBP13.33□□□□□ -0.28
TMEM53-206ENST00000420706 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.33□□□□□ -0.28
TMEM53-206ENST00000420706 IRF2BP2Q7Z5L9 587 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 SPRED2Q7Z698 418 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 CEP57Q86XR8 500 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 KLHL23Q8NBE8 558 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 RBBP8NLQ8NC74 664 aaPredicted RBP13.33□□□□□ -0.28
TMEM53-206ENST00000420706 DNAJC7Q99615 494 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 C17orf80Q9BSJ5 609 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 PLVAPQ9BX97 442 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 ELOVL4Q9GZR5 314 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 NKX2-4Q9H2Z4 354 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 SNX25Q9H3E2 840 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 CHST7Q9NS84 486 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 ABHD10Q9NUJ1 306 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 MSRAQ9UJ68 235 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 PDE4DIPQ5VU43 2346 aa13.33□□□□□ -0.28
TMEM53-206ENST00000420706 NLRC5Q86WI3 1866 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 A8MXQ7 604 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 C5orf67F2Z3F1 127 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 HCRTO43612 131 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 OAZ2O95190 189 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 PDGFRBP09619 1106 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 FERP16591 822 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 CTNNB1P35222 781 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 GSDMDP57764 484 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 ERVK-21P61565 698 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 TAP1Q03518 808 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 KRT17Q04695 432 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 TSR1Q2NL82 804 aaKnown RBP13.32□□□□□ -0.28
TMEM53-206ENST00000420706 ZNF394Q53GI3 561 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 RTP2Q5QGT7 225 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
TMEM53-206ENST00000420706 OVOS1Q6IE37 1185 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 WDR59Q6PJI9 974 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 GPIHBP1Q8IV16 184 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 CRYBG2Q8N1P7 616 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 THEM5Q8N1Q8 247 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 SLC4A11Q8NBS3 891 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 TMEM176AQ96HP8 235 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 B3GALT6Q96L58 329 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 SAMD11Q96NU1 681 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
TMEM53-206ENST00000420706 RTP3Q9BQQ7 232 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 TTPALQ9BTX7 342 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 HERC2P3Q9BVR0 1158 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 NT5C1AQ9BXI3 368 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 ACP6Q9NPH0 428 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 DDX43Q9NXZ2 648 aaKnown RBP13.32□□□□□ -0.28
TMEM53-206ENST00000420706 HMGXB4Q9UGU5 601 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 VWA8A3KMH1 1905 aa13.32□□□□□ -0.28
TMEM53-206ENST00000420706 TBC1D4O60343 1298 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 CALCAP01258 141 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 PAEPP09466 180 aa13.31□□□□□ -0.28
TMEM53-206ENST00000420706 CCDC172P0C7W6 258 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms