RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 HHATQ5VTY9 493 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 GPAT2Q6NUI2 795 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 VSIG1Q86XK7 387 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RSAD2Q8WXG1 361 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 GRAMD1AQ96CP6 724 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MTMR12Q9C0I1 747 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NIF3L1Q9GZT8 377 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DHX33Q9H6R0 707 aaKnown RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NXF1Q9UBU9 619 aaKnown RBP12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 STK38LQ9Y2H1 464 aa12.36□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 LIASO43766 372 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SPAG7O75391 227 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TCEA3O75764 348 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TNNC2P02585 160 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CA4P22748 312 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SPARCL1Q14515 664 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SURF1Q15526 300 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MAPK6Q16659 721 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SGSM1Q2NKQ1 1148 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZNF699Q32M78 642 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ACSF2Q96CM8 615 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 STYXL1Q9Y6J8 313 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NOP56O00567 594 aaKnown RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DNALI1O14645 258 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 LSM8O95777 96 aaKnown RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NEFHP12036 1026 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PSMA2P25787 234 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PHBP35232 272 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 WNT7BP56706 349 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ELF3P78545 371 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TFDP3Q5H9I0 405 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CRELD2Q6UXH1 353 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SPOCD1Q6ZMY3 1216 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DHX37Q8IY37 1157 aaKnown RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SLITRK1Q96PX8 696 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PDGFDQ9GZP0 370 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CISHQ9NSE2 258 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ACTL7BQ9Y614 415 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 F8VP50 259 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 GOLGA8MH3BSY2 632 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ADCY3O60266 1144 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TOM1L1O75674 476 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZSCAN5DPP0CG00 497 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PDIA2Q13087 525 aaKnown RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 EEPD1Q7L9B9 569 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 WDR49Q8IV35 697 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 LRRC8CQ8TDW0 803 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 FHDC1Q9C0D6 1143 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZWILCHQ9H900 591 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SENP1Q9P0U3 644 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 FZD1Q9UP38 647 aa12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TMEM191CA6NGB0 347 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PECAM1P16284 738 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MARK3P27448 753 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZNF280AP59817 542 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MYL6P60660 151 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 COPS2P61201 443 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 OSTNP61366 133 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MORF4L2Q15014 288 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 BRSK2Q8IWQ3 736 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 THNSL1Q8IYQ7 743 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TRABDQ9H4I3 376 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TMEM134Q9H6X4 195 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 LGALS13Q9UHV8 139 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 SLC12A4Q9UP95 1085 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 IKBKGQ9Y6K9 419 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 A0A1B0GUA9 196 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TP73O15350 636 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PIGRP01833 764 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ABHD2P08910 425 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ARL2P36404 184 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CYP4A22Q5TCH4 519 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 LRRC38Q5VT99 294 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZPBP2Q6X784 338 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RNF149Q8NC42 400 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 DNERQ8NFT8 737 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PYROXD1Q8WU10 500 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ANKRD36BP1Q96IX9 119 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MYCBPQ99417 103 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 MPHOSPH6Q99547 160 aaKnown RBP12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NOD2Q9HC29 1040 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 ATP2A2P16615 1042 aaKnown RBP12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CNTN2Q02246 1040 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 HIF1AQ16665 826 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 PCGF5Q86SE9 256 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 NCAPG2Q86XI2 1143 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TAB3Q8N5C8 712 aaPredicted RBP12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 TMEM121Q9BTD3 319 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 UBN1Q9NPG3 1134 aa12.34□□□□□ -0.43
CSPG4P3Y-201ENST00000418188 RBBP6Q7Z6E9 1792 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms