RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 DNAJB7Q7Z6W7 309 aaPredicted RBP27.34■■□□□ 1.97
VEGFA-208ENST00000417285 DEPDC1BQ8WUY9 529 aa27.34■■□□□ 1.97
VEGFA-208ENST00000417285 BORCS6Q96GS4 357 aa27.34■■□□□ 1.97
VEGFA-208ENST00000417285 ZCWPW1Q9H0M4 648 aa27.34■■□□□ 1.97
VEGFA-208ENST00000417285 DNAJC25Q9H1X3 360 aa27.34■■□□□ 1.97
VEGFA-208ENST00000417285 TRPV5Q9NQA5 729 aa27.34■■□□□ 1.97
VEGFA-208ENST00000417285 CFAP54Q96N23 3096 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 FAM186AA6NE01 2351 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 EXTL3O43909 919 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 CASP5P51878 434 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 TEAD2Q15562 447 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 BRSK2Q8IWQ3 736 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 EFCAB13Q8IY85 973 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 IQUBQ8NA54 791 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 OR10T2Q8NGX3 314 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 SHKBP1Q8TBC3 707 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 ZSCAN18Q8TBC5 510 aaPredicted RBP27.33■■□□□ 1.97
VEGFA-208ENST00000417285 PSMG2Q969U7 264 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 ZNF560Q96MR9 790 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 SLITRK6Q9H5Y7 841 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 LTB4R2Q9NPC1 389 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 KBTBD4Q9NVX7 518 aa27.33■■□□□ 1.97
VEGFA-208ENST00000417285 MAN2B1O00754 1011 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 GLULP15104 373 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 TFAMQ00059 246 aaKnown RBP27.32■■□□□ 1.96
VEGFA-208ENST00000417285 E2F4Q16254 413 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 SLC39A12Q504Y0 691 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 TPRG1Q6ZUI0 275 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 MFSD6LQ8IWD5 586 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 DCP1BQ8IZD4 617 aaKnown RBP27.32■■□□□ 1.96
VEGFA-208ENST00000417285 SPRYD3Q8NCJ5 442 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 SAAL1Q96ER3 474 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 TMEM209Q96SK2 561 aa27.32■■□□□ 1.96
VEGFA-208ENST00000417285 RBAKQ9NYW8 714 aaPredicted RBP27.32■■□□□ 1.96
VEGFA-208ENST00000417285 GJA1P17302 382 aa27.31■■□□□ 1.96
VEGFA-208ENST00000417285 WSCD1Q658N2 575 aa27.31■■□□□ 1.96
VEGFA-208ENST00000417285 SHC4Q6S5L8 630 aa27.31■■□□□ 1.96
VEGFA-208ENST00000417285 TMC8Q8IU68 726 aa27.31■■□□□ 1.96
VEGFA-208ENST00000417285 CLDN23Q96B33 292 aa27.31■■□□□ 1.96
VEGFA-208ENST00000417285 DHX58Q96C10 678 aa27.31■■□□□ 1.96
VEGFA-208ENST00000417285 HEBP1Q9NRV9 189 aa27.31■■□□□ 1.96
VEGFA-208ENST00000417285 CFAP45Q9UL16 551 aa27.31■■□□□ 1.96
VEGFA-208ENST00000417285 MTF2Q9Y483 593 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-208ENST00000417285 A0A1W2PRU2 124 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 TULP1O00294 542 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-208ENST00000417285 NRG2O14511 850 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-208ENST00000417285 LRRN2O75325 713 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 PRPF6O94906 941 aaKnown RBP27.3■■□□□ 1.96
VEGFA-208ENST00000417285 CD72P21854 359 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 VIPR2P41587 438 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 GRM2Q14416 872 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 VEPH1Q14D04 833 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 ZC3H14Q6PJT7 736 aaKnown RBP27.3■■□□□ 1.96
VEGFA-208ENST00000417285 VITQ6UXI7 678 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 SPPL2BQ8TCT7 592 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 MAGEF1Q9HAY2 307 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 AGAP1Q9UPQ3 857 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 ZNF292O60281 2723 aa27.3■■□□□ 1.96
VEGFA-208ENST00000417285 ZNF263O14978 683 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 SP9P0CG40 484 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 GDI1P31150 447 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 RPS9P46781 194 aaKnown RBP27.29■■□□□ 1.96
VEGFA-208ENST00000417285 ME1P48163 572 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 ARHGAP15Q53QZ3 475 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 CNNM4Q6P4Q7 775 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 LRRC52Q8N7C0 313 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 FAM200AQ8TCP9 573 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 SEPT5Q99719 369 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-208ENST00000417285 CBWD1Q9BRT8 395 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 FGFBP2Q9BYJ0 223 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 TRIM9Q9C026 710 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 ZNF334Q9HCZ1 680 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-208ENST00000417285 SPATA6Q9NWH7 488 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-208ENST00000417285 FAM13BQ9NYF5 915 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 ITGA11Q9UKX5 1188 aa27.29■■□□□ 1.96
VEGFA-208ENST00000417285 MYO15AQ9UKN7 3530 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 POLR2BP30876 1174 aaKnown RBP27.28■■□□□ 1.96
VEGFA-208ENST00000417285 MLLT6P55198 1093 aaPredicted RBP27.28■■□□□ 1.96
VEGFA-208ENST00000417285 ASIC1P78348 528 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 RBP5P82980 135 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 PKP1Q13835 747 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 SURF1Q15526 300 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 MGAT5BQ3V5L5 792 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 GPD1LQ8N335 351 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 CSGALNACT2Q8N6G5 542 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 C1orf127Q8N9H9 656 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 ZSWIM2Q8NEG5 633 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 ATXN3LQ9H3M9 355 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 PCIF1Q9H4Z3 704 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 FBXO4Q9UKT5 387 aa27.28■■□□□ 1.96
VEGFA-208ENST00000417285 R3HCC1Q9Y3T6 440 aaKnown RBP27.28■■□□□ 1.96
VEGFA-208ENST00000417285 GVINP1Q7Z2Y8 2422 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 F5P12259 2224 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 GOLGA8IPA6NC78 632 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 GOLGA8JA6NMD2 632 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 HEPACAM2A8MVW5 462 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 LAMTOR5O43504 91 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 HUS1O60921 280 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 ITGB3P05106 788 aa27.27■■□□□ 1.96
VEGFA-208ENST00000417285 WEE1P30291 646 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms