RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 C2orf15Q8WU43 125 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 DEPDC1BQ8WUY9 529 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 ZSWIM3Q96MP5 696 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 FGFBP2Q9BYJ0 223 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 BCO2Q9BYV7 579 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 BRD9Q9H8M2 597 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 TRPV4Q9HBA0 871 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 LTB4R2Q9NPC1 389 aa18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 RBAKQ9NYW8 714 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-208ENST00000416159 CACNA1IQ9P0X4 2223 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 FAM170BA6NMN3 283 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 TULP1O00294 542 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 LRRN2O75325 713 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 FGF19O95750 216 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 GLULP15104 373 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 PSMC3P17980 439 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 GRM2Q14416 872 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 SLC39A12Q504Y0 691 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 WSCD1Q658N2 575 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 TPRG1Q6ZUI0 275 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 DNAJB7Q7Z6W7 309 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 DCP1BQ8IZD4 617 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 IRF7Q92985 503 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 PSMG2Q969U7 264 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 DHX58Q96C10 678 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 CBWD1Q9BRT8 395 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 PCIF1Q9H4Z3 704 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 SLITRK6Q9H5Y7 841 aa18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 MRPS17Q9Y2R5 130 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-208ENST00000416159 A0A1W2PRU2 124 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 GOLGA8IPA6NC78 632 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 GOLGA8JA6NMD2 632 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 NCAM2O15394 837 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 ZSCAN22P10073 491 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 WNT7BP56706 349 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 FOXD4L5Q5VV16 416 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 SHC4Q6S5L8 630 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 VITQ6UXI7 678 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 ZNF852Q6ZMS4 543 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 MFSD6LQ8IWD5 586 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 GPD1LQ8N335 351 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 TTC9BQ8N6N2 239 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 C1orf127Q8N9H9 656 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 SPPL2BQ8TCT7 592 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 FOXD4L4Q8WXT5 416 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 TRIM9Q9C026 710 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 SEMA4AQ9H3S1 761 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 TRPV5Q9NQA5 729 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 HEBP1Q9NRV9 189 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 AGAP1Q9UPQ3 857 aa18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 MTF2Q9Y483 593 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 ZFHX2Q9C0A1 2572 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-208ENST00000416159 TSC2P49815 1807 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 MAN2B1O00754 1011 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 F13A1P00488 732 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 ITGB3P05106 788 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 CD72P21854 359 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 POLR2BP30876 1174 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 GDI1P31150 447 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 VIPR2P41587 438 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 ASIC1P78348 528 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 VEPH1Q14D04 833 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 MGAT5BQ3V5L5 792 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 ATL3Q6DD88 541 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 CNNM4Q6P4Q7 775 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 LRRTM3Q86VH5 581 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 CSGALNACT2Q8N6G5 542 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 LRRC52Q8N7C0 313 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 FAM200AQ8TCP9 573 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 KCNG4Q8TDN1 519 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 NOC3LQ8WTT2 800 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 SEPT5Q99719 369 aaPredicted RBP18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 ATXN3LQ9H3M9 355 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 MAGEF1Q9HAY2 307 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 PDE11AQ9HCR9 933 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 ZNF334Q9HCZ1 680 aaPredicted RBP18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 ITGA11Q9UKX5 1188 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 RIF1Q5UIP0 2472 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 FAM186AA6NE01 2351 aa18.95■□□□□ 0.62
PDLIM2-208ENST00000416159 F5P12259 2224 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 HEPACAM2A8MVW5 462 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 ZNF263O14978 683 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 EIF3DO15371 548 aaKnown RBP eCLIP18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 HUS1O60921 280 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 SOAT2O75908 522 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 TMEM191BP0C7N4 346 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 SP9P0CG40 484 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 HAPLN1P10915 354 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 TARSP26639 723 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 RBP5P82980 135 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 TSPY1Q01534 308 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 SURF1Q15526 300 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 TAF12Q16514 161 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 ARHGAP15Q53QZ3 475 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 GAREM2Q75VX8 874 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 CLDN23Q96B33 292 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 C7orf25Q9BPX7 421 aa18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 R3HCC1Q9Y3T6 440 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-208ENST00000416159 ZNF233A6NK53 670 aa18.93■□□□□ 0.62
PDLIM2-208ENST00000416159 LAMTOR5O43504 91 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms