RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SFSWAPQ12872 951 aaKnown RBP12.55□□□□□ -0.4
PTPRF-205ENST00000414879 LLGL1Q15334 1064 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 MAP1SQ66K74 1059 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-205ENST00000414879 ACAD11Q709F0 780 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 SLC9A9Q8IVB4 645 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 USP38Q8NB14 1042 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 TPCN2Q8NHX9 752 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 ZNF512Q96ME7 567 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-205ENST00000414879 WDR24Q96S15 920 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 TMEM117Q9H0C3 514 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.46e-7■■□□□ 13.5
PTPRF-205ENST00000414879 CYP11B1P15538 503 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 GTF2A1P52655 376 aaPredicted RBP12.55□□□□□ -0.4
PTPRF-205ENST00000414879 MFSD10Q14728 455 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 CHADLQ6NUI6 762 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 ZBED8Q8IZ13 594 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 MCUQ8NE86 351 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 SLC30A5Q8TAD4 765 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 TBCBQ99426 244 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 CBWD1Q9BRT8 395 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 NAT9Q9BTE0 207 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 SUN2Q9UH99 717 aa12.55□□□□□ -0.4
PTPRF-205ENST00000414879 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
PTPRF-205ENST00000414879 CES2O00748 559 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 PDGFRBP09619 1106 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 PSEN2P49810 448 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 ACAP1Q15027 740 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 E2F4Q16254 413 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 CELF3Q5SZQ8 465 aaKnown RBP12.54□□□□□ -0.4
PTPRF-205ENST00000414879 ZNF280DQ6N043 979 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TRIM67Q6ZTA4 783 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TLK2Q86UE8 772 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 GANCQ8TET4 914 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 PORCNQ9H237 461 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 BAIAP2L1Q9UHR4 511 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 CAPN7Q9Y6W3 813 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 LRRC10BA6NIK2 292 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 ANXA9O76027 345 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TMCC1O94876 653 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 WEE2P0C1S8 567 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 SLC11A2P49281 568 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 SLC12A3P55017 1021 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TMPRSS15P98073 1019 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 ST3GAL1Q11201 340 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 NAPEPLDQ6IQ20 393 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 C11orf63Q6NUN7 778 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 ZFPM1Q8IX07 1006 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 RAB42Q8N4Z0 105 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 C1orf131Q8NDD1 294 aaKnown RBP12.54□□□□□ -0.4
PTPRF-205ENST00000414879 ZSWIM1Q9BR11 485 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TRIM15Q9C019 465 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 GPRC5CQ9NQ84 441 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 INTS13Q9NVM9 706 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 XIRP1Q702N8 1843 aaKnown RBP12.54□□□□□ -0.4
PTPRF-205ENST00000414879 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
PTPRF-205ENST00000414879 SPEF2Q9C093 1822 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 F8VZ95 297 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 NCAM2O15394 837 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 KCNN4O15554 427 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 AKAP3O75969 853 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 MMEP08473 750 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 NOGQ13253 232 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 C1orf54Q8WWF1 131 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TINF2Q9BSI4 451 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 BLOC1S4Q9NUP1 217 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 ZFATQ9P243 1243 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TRPV2Q9Y5S1 764 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 UMODL1Q5DID0 1318 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 COL1A2P08123 1366 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 FOXN3O00409 490 aaPredicted RBP12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TMEM62Q0P6H9 643 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 PLD1Q13393 1074 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 FBXO47Q5MNV8 452 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 KLRG1Q96E93 195 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 CNPY3Q9BT09 278 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 FBXL5Q9UKA1 691 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 APOBEC2Q9Y235 224 aaKnown RBP12.54□□□□□ -0.4
PTPRF-205ENST00000414879 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
PTPRF-205ENST00000414879 USP27XA6NNY8 438 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 MEIS2O14770 477 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 HNRNPCL1O60812 293 aaKnown RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 RGS7P49802 495 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 HYIQ5T013 277 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 KCNF1Q9H3M0 494 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 HDAC6Q9UBN7 1215 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 BARX2Q9UMQ3 279 aaPredicted RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ROBO1Q9Y6N7 1651 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 CRYBG1Q9Y4K1 1723 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 A0A087WZ62 844 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 NEMP1O14524 444 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 BST2Q10589 180 aaKnown RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 TIGD7Q6NT04 549 aaPredicted RBP12.53□□□□□ -0.4
PTPRF-205ENST00000414879 ADGRF2Q8IZF7 708 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 TMEM86AQ8N2M4 240 aa12.53□□□□□ -0.4
PTPRF-205ENST00000414879 FDXACB1Q9BRP7 624 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms