RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 SYAP1Q96A49 352 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-207ENST00000414664 WDR6Q9NNW5 1121 aaKnown RBP27.18■■□□□ 1.94
CPNE1-207ENST00000414664 LMBRD1Q9NUN5 540 aa27.18■■□□□ 1.94
CPNE1-207ENST00000414664 L1RE1Q9UN81 338 aa27.18■■□□□ 1.94
CPNE1-207ENST00000414664 STAU1O95793 577 aaKnown RBP27.17■■□□□ 1.94
CPNE1-207ENST00000414664 LRG1P02750 347 aa27.17■■□□□ 1.94
CPNE1-207ENST00000414664 C4BPAP04003 597 aaKnown RBP27.17■■□□□ 1.94
CPNE1-207ENST00000414664 DLG4P78352 724 aa27.17■■□□□ 1.94
CPNE1-207ENST00000414664 CD320Q9NPF0 282 aa27.17■■□□□ 1.94
CPNE1-207ENST00000414664 USTQ9Y2C2 406 aa27.17■■□□□ 1.94
CPNE1-207ENST00000414664 VCANP13611 3396 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 CCL16O15467 120 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 OR4Q2P0C623 313 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 LHX1P48742 406 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 MYL7Q01449 175 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 SMARCB1Q12824 385 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 TDRD10Q5VZ19 366 aaKnown RBP27.16■■□□□ 1.94
CPNE1-207ENST00000414664 DCP1BQ8IZD4 617 aaKnown RBP27.16■■□□□ 1.94
CPNE1-207ENST00000414664 OR10T2Q8NGX3 314 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 ACSF2Q96CM8 615 aaPredicted RBP27.16■■□□□ 1.94
CPNE1-207ENST00000414664 ZCWPW1Q9H0M4 648 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 CLSTN2Q9H4D0 955 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 POLIQ9UNA4 740 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 TSC2P49815 1807 aa27.16■■□□□ 1.94
CPNE1-207ENST00000414664 BICDL2A1A5D9 508 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 SEC24AO95486 1093 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 FAM163BP0C2L3 166 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 CD44P16070 742 aaKnown RBP27.15■■□□□ 1.94
CPNE1-207ENST00000414664 BMP6P22004 513 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 TNNC1P63316 161 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 TSPY1Q01534 308 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 SOWAHAQ2M3V2 549 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 ZACNQ401N2 412 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 OTOP3Q7RTS5 596 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 ADGRF2Q8IZF7 708 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 PLCD3Q8N3E9 789 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 FEZF2Q8TBJ5 459 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 PGLYRP2Q96PD5 576 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 MMS19Q96T76 1030 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 RTP3Q9BQQ7 232 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 ACBD6Q9BR61 282 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 INSL5Q9Y5Q6 135 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 C2orf16Q68DN1 1984 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 CLUHO75153 1309 aa27.15■■□□□ 1.94
CPNE1-207ENST00000414664 PPP1R3GB7ZBB8 358 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 SLC16A3O15427 465 aaKnown RBP27.14■■□□□ 1.94
CPNE1-207ENST00000414664 PMS1P54277 932 aaKnown RBP27.14■■□□□ 1.94
CPNE1-207ENST00000414664 MYL6P60660 151 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 NCOA4Q13772 614 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 WDR72Q3MJ13 1102 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 KLHL10Q6JEL2 608 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 FOXR2Q6PJQ5 311 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 SV2AQ7L0J3 742 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 ZC3H3Q8IXZ2 948 aaKnown RBP27.14■■□□□ 1.94
CPNE1-207ENST00000414664 TDRD5Q8NAT2 981 aaKnown RBP27.14■■□□□ 1.94
CPNE1-207ENST00000414664 C2orf15Q8WU43 125 aaKnown RBP27.14■■□□□ 1.94
CPNE1-207ENST00000414664 TMEM209Q96SK2 561 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 DDX43Q9NXZ2 648 aaKnown RBP27.14■■□□□ 1.94
CPNE1-207ENST00000414664 HSFX1Q9UBD0 423 aa27.14■■□□□ 1.94
CPNE1-207ENST00000414664 TRIM49BA6NDI0 452 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 STX10O60499 249 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 CLSTN1O94985 981 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 PCSK1P29120 753 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 SLC39A12Q504Y0 691 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 LIMS2Q7Z4I7 341 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 GRASPQ7Z6J2 395 aaPredicted RBP27.13■■□□□ 1.93
CPNE1-207ENST00000414664 ELMOD1Q8N336 334 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 NELFBQ8WX92 580 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 EEF2KMTQ96G04 330 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 NUP62CLQ9H1M0 184 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 VRTNQ9H8Y1 702 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 TTC28Q96AY4 2481 aa27.13■■□□□ 1.93
CPNE1-207ENST00000414664 MTMR11A4FU01 709 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 GABRDO14764 452 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 SP100P23497 879 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-207ENST00000414664 GTF2H1P32780 548 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 MCCD1P59942 119 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-207ENST00000414664 PLD1Q13393 1074 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 SGSM1Q2NKQ1 1148 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 ZNF699Q32M78 642 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 C1orf220Q5T0J3 134 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 TAF4BQ92750 862 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 CEP63Q96MT8 703 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 XYLT2Q9H1B5 865 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 NCOR1O75376 2440 aa27.12■■□□□ 1.93
CPNE1-207ENST00000414664 C2CD4DB7Z1M9 353 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 TRIM49P0CI25 452 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 TRIM49CP0CI26 452 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 PTPN2P17706 415 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 DUSP4Q13115 394 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 NFE2Q16621 373 aaPredicted RBP27.11■■□□□ 1.93
CPNE1-207ENST00000414664 ZNF667Q5HYK9 610 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 RNF135Q8IUD6 432 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 ZDHHC14Q8IZN3 488 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 ATAD1Q8NBU5 361 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 SPPL2BQ8TCT7 592 aa27.11■■□□□ 1.93
CPNE1-207ENST00000414664 ZNF512Q96ME7 567 aaPredicted RBP27.11■■□□□ 1.93
CPNE1-207ENST00000414664 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.11■■□□□ 1.93
CPNE1-207ENST00000414664 NXF1Q9UBU9 619 aaKnown RBP27.11■■□□□ 1.93
CPNE1-207ENST00000414664 DENND4AQ7Z401 1863 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms