RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 ATP2A1O14983 1001 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 MSH2P43246 934 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 VCPP55072 806 aaKnown RBP17.63■□□□□ 0.41
LIMS2-208ENST00000410011 TMED2Q15363 201 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 PDK4Q16654 411 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 PARP6Q2NL67 630 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 GNPTABQ3T906 1256 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 RNASEH2BQ5TBB1 312 aaKnown RBP17.63■□□□□ 0.41
LIMS2-208ENST00000410011 MFSD7Q6UXD7 560 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 SPOCD1Q6ZMY3 1216 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 PCGF5Q86SE9 256 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 FBF1Q8TES7 1133 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 AGAP11Q8TF27 550 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 ATG4CQ96DT6 458 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 FAM84AQ96KN4 292 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 FHDC1Q9C0D6 1143 aaPredicted RBP17.63■□□□□ 0.41
LIMS2-208ENST00000410011 TXLNGQ9NUQ3 528 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 GGT7Q9UJ14 662 aa17.63■□□□□ 0.41
LIMS2-208ENST00000410011 KRT16P08779 473 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 SIP14410 1827 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 CDH5P33151 784 aaPredicted RBP17.62■□□□□ 0.41
LIMS2-208ENST00000410011 ARSEP51690 589 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 POLGP54098 1239 aaPredicted RBP17.62■□□□□ 0.41
LIMS2-208ENST00000410011 RPL7AP62424 266 aaKnown RBP17.62■□□□□ 0.41
LIMS2-208ENST00000410011 DGKZQ13574 1117 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 MOGSQ13724 837 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 ZKSCAN8Q15776 578 aaPredicted RBP17.62■□□□□ 0.41
LIMS2-208ENST00000410011 PARP14Q460N5 1801 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 TFDP3Q5H9I0 405 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 PPP1R15BQ5SWA1 713 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 CYP4F22Q6NT55 531 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 ANKLE1Q8NAG6 615 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 NIFKQ9BYG3 293 aaKnown RBP17.62■□□□□ 0.41
LIMS2-208ENST00000410011 TRABDQ9H4I3 376 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 PCDH9Q9HC56 1237 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 PNMA3Q9UL41 463 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 USH1CQ9Y6N9 552 aa17.62■□□□□ 0.41
LIMS2-208ENST00000410011 hCG_1818297A0A087WSY0 165 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 PECAM1P16284 738 aaPredicted RBP17.61■□□□□ 0.41
LIMS2-208ENST00000410011 GLRA2P23416 452 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 SLC8A3P57103 927 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 NCOA4Q13772 614 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 MTERF2Q49AM1 385 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 CENPUQ71F23 418 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 POLNQ7Z5Q5 900 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 NIM1KQ8IY84 436 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 RAB3IPQ96QF0 476 aaPredicted RBP17.61■□□□□ 0.41
LIMS2-208ENST00000410011 FAM118BQ9BPY3 351 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 MSTO1Q9BUK6 570 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 NOP53Q9NZM5 478 aaKnown RBP17.61■□□□□ 0.41
LIMS2-208ENST00000410011 KIAA1217Q5T5P2 1943 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 ASS1P00966 412 aaKnown RBP17.61■□□□□ 0.41
LIMS2-208ENST00000410011 SSR1P43307 286 aaKnown RBP17.61■□□□□ 0.41
LIMS2-208ENST00000410011 CCNG1P51959 295 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 BACE1P56817 501 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 ZNF252P-AS1Q0IIN9 211 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 WDR72Q3MJ13 1102 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 ATP13A4Q4VNC1 1196 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 MAB21L3Q8N8X9 362 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 GLIS1Q8NBF1 620 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 DEPTORQ8TB45 409 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 SLC35B2Q8TB61 432 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 N4BP2L2Q92802 583 aaPredicted RBP17.61■□□□□ 0.41
LIMS2-208ENST00000410011 TBC1D31Q96DN5 1066 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 TMEM237Q96Q45 408 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 SMC6Q96SB8 1091 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 IMPG2Q9BZV3 1241 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 C15orf41Q9Y2V0 281 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 IVNS1ABPQ9Y6Y0 642 aa17.61■□□□□ 0.41
LIMS2-208ENST00000410011 LOC102724159A0A0B4J2E5 919 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 TYROBPO43914 113 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 ANP32DO95626 131 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 KRT1P04264 644 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 KRT10P13645 584 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 ATP4AP20648 1035 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 EIF4BP23588 611 aaKnown RBP17.6■□□□□ 0.41
LIMS2-208ENST00000410011 ICAM3P32942 547 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 CDKN2BP42772 138 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 CXCL9Q07325 125 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 GPS1Q13098 491 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 SETDB1Q15047 1291 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 PWP2Q15269 919 aaKnown RBP17.6■□□□□ 0.41
LIMS2-208ENST00000410011 SEPT14Q6ZU15 432 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 TMEM35BQ8NCS4 154 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 ASAP3Q8TDY4 903 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 RSRC1Q96IZ7 334 aaKnown RBP17.6■□□□□ 0.41
LIMS2-208ENST00000410011 C12orf42Q96LP6 360 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 ZNF214Q9UL59 606 aaPredicted RBP17.6■□□□□ 0.41
LIMS2-208ENST00000410011 PHTF1Q9UMS5 762 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 PCDHGC3Q9UN70 934 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 SMAPO00193 183 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 EDF1O60869 148 aaKnown RBP17.6■□□□□ 0.41
LIMS2-208ENST00000410011 OATP04181 439 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 LACTBP83111 547 aaPredicted RBP17.6■□□□□ 0.41
LIMS2-208ENST00000410011 CRYMQ14894 314 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 EFHC2Q5JST6 749 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 ZPBP2Q6X784 338 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 PRUNE1Q86TP1 453 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 WDR49Q8IV35 697 aa17.6■□□□□ 0.41
LIMS2-208ENST00000410011 OR5B17Q8NGF7 314 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms