RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ATICP31939 592 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 RAD23BP54727 409 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 CDH8P55286 799 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 KLF1Q13351 362 aaPredicted RBP21.34■■□□□ 1.01
USP39-204ENST00000409766 PPP1R15BQ5SWA1 713 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 ZNF410Q86VK4 478 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 SH2D3CQ8N5H7 860 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 OR2W6PQ8NHA6 318 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 SCLT1Q96NL6 688 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 CEP83Q9Y592 693 aa21.34■■□□□ 1.01
USP39-204ENST00000409766 PASKQ96RG2 1323 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 ERLIN2O94905 339 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 ECEL1O95672 775 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 PAEPP09466 180 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 ZNF844Q08AG5 666 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 ZNF252P-AS1Q0IIN9 211 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 DNAJC24Q6P3W2 148 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 ERICH1Q86X53 443 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 ATP6V1G3Q96LB4 118 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 LHX5Q9H2C1 402 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 TMBIM4Q9HC24 238 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 PARP2Q9UGN5 583 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 USTQ9Y2C2 406 aa21.33■■□□□ 1.01
USP39-204ENST00000409766 DOCK3Q8IZD9 2030 aa21.33■■□□□ 1
USP39-204ENST00000409766 RPS6KA5O75582 802 aa21.33■■□□□ 1
USP39-204ENST00000409766 RALAP11233 206 aa21.33■■□□□ 1
USP39-204ENST00000409766 DENND1BQ6P3S1 775 aa21.33■■□□□ 1
USP39-204ENST00000409766 EXD1Q8NHP7 514 aa21.33■■□□□ 1
USP39-204ENST00000409766 MCEEQ96PE7 176 aa21.33■■□□□ 1
USP39-204ENST00000409766 SMYD3Q9H7B4 428 aa21.33■■□□□ 1
USP39-204ENST00000409766 CHST7Q9NS84 486 aa21.33■■□□□ 1
USP39-204ENST00000409766 SETD4Q9NVD3 440 aa21.33■■□□□ 1
USP39-204ENST00000409766 LCMT1Q9UIC8 334 aa21.33■■□□□ 1
USP39-204ENST00000409766 ATP8A1Q9Y2Q0 1164 aa21.33■■□□□ 1
USP39-204ENST00000409766 MED7O43513 233 aa21.32■■□□□ 1
USP39-204ENST00000409766 CD19P15391 556 aa21.32■■□□□ 1
USP39-204ENST00000409766 TAP1Q03518 808 aa21.32■■□□□ 1
USP39-204ENST00000409766 TMEM132DQ14C87 1099 aa21.32■■□□□ 1
USP39-204ENST00000409766 CCDC50Q8IVM0 306 aa21.32■■□□□ 1
USP39-204ENST00000409766 C3orf20Q8ND61 904 aa21.32■■□□□ 1
USP39-204ENST00000409766 ACAP3Q96P50 834 aa21.32■■□□□ 1
USP39-204ENST00000409766 SLC5A4Q9NY91 659 aa21.32■■□□□ 1
USP39-204ENST00000409766 C2CD2Q9Y426 696 aa21.32■■□□□ 1
USP39-204ENST00000409766 RRN3P2A6NIE6 340 aa21.31■■□□□ 1
USP39-204ENST00000409766 A6NJR5 290 aa21.31■■□□□ 1
USP39-204ENST00000409766 HMGB1P1B2RPK0 211 aaPredicted RBP21.31■■□□□ 1
USP39-204ENST00000409766 SKOR1P84550 965 aa21.31■■□□□ 1
USP39-204ENST00000409766 OGDHQ02218 1023 aa21.31■■□□□ 1
USP39-204ENST00000409766 SNX1Q13596 522 aa21.31■■□□□ 1
USP39-204ENST00000409766 EMC10Q5UCC4 262 aa21.31■■□□□ 1
USP39-204ENST00000409766 LEKR1Q6ZMV7 388 aa21.31■■□□□ 1
USP39-204ENST00000409766 SLC4A11Q8NBS3 891 aa21.31■■□□□ 1
USP39-204ENST00000409766 ATG4AQ8WYN0 398 aa21.31■■□□□ 1
USP39-204ENST00000409766 ADPGKQ9BRR6 497 aa21.31■■□□□ 1
USP39-204ENST00000409766 DCLK3Q9C098 648 aa21.31■■□□□ 1
USP39-204ENST00000409766 GOLGA6L10A6NI86 522 aa21.31■■□□□ 1
USP39-204ENST00000409766 CILPO75339 1184 aa21.31■■□□□ 1
USP39-204ENST00000409766 MYZAPP0CAP1 466 aa21.31■■□□□ 1
USP39-204ENST00000409766 POLR2BP30876 1174 aaKnown RBP21.31■■□□□ 1
USP39-204ENST00000409766 SSR1P43307 286 aaKnown RBP21.31■■□□□ 1
USP39-204ENST00000409766 ZSCAN26Q16670 478 aa21.31■■□□□ 1
USP39-204ENST00000409766 MORN1Q5T089 497 aa21.31■■□□□ 1
USP39-204ENST00000409766 CYP4A22Q5TCH4 519 aa21.31■■□□□ 1
USP39-204ENST00000409766 DCUN1D2Q6PH85 259 aa21.31■■□□□ 1
USP39-204ENST00000409766 ART4Q93070 314 aa21.31■■□□□ 1
USP39-204ENST00000409766 TWNKQ96RR1 684 aa21.31■■□□□ 1
USP39-204ENST00000409766 HEMGNQ9BXL5 484 aa21.31■■□□□ 1
USP39-204ENST00000409766 OSBPL8Q9BZF1 889 aa21.31■■□□□ 1
USP39-204ENST00000409766 ADAMTS10Q9H324 1103 aa21.31■■□□□ 1
USP39-204ENST00000409766 EPB41L4BQ9H329 900 aa21.31■■□□□ 1
USP39-204ENST00000409766 CYP3A43Q9HB55 503 aa21.31■■□□□ 1
USP39-204ENST00000409766 HMGXB4Q9UGU5 601 aa21.31■■□□□ 1
USP39-204ENST00000409766 CPA4Q9UI42 421 aa21.31■■□□□ 1
USP39-204ENST00000409766 CYTH4Q9UIA0 394 aa21.31■■□□□ 1
USP39-204ENST00000409766 R3HDM2Q9Y2K5 976 aaKnown RBP21.31■■□□□ 1
USP39-204ENST00000409766 DYNC1LI2O43237 492 aaPredicted RBP21.3■■□□□ 1
USP39-204ENST00000409766 TCF4P15884 667 aa21.3■■□□□ 1
USP39-204ENST00000409766 FGFR4P22455 802 aa21.3■■□□□ 1
USP39-204ENST00000409766 PPP1R7Q15435 360 aa21.3■■□□□ 1
USP39-204ENST00000409766 KIZQ2M2Z5 673 aa21.3■■□□□ 1
USP39-204ENST00000409766 PTPN20Q4JDL3 420 aa21.3■■□□□ 1
USP39-204ENST00000409766 PRAMEF19Q5SWL8 479 aa21.3■■□□□ 1
USP39-204ENST00000409766 CST9Q5W186 159 aa21.3■■□□□ 1
USP39-204ENST00000409766 ANKS1BQ7Z6G8 1248 aa21.3■■□□□ 1
USP39-204ENST00000409766 HPDLQ96IR7 371 aa21.3■■□□□ 1
USP39-204ENST00000409766 FAM129AQ9BZQ8 928 aa21.3■■□□□ 1
USP39-204ENST00000409766 ELOVL4Q9GZR5 314 aa21.3■■□□□ 1
USP39-204ENST00000409766 HOMER3Q9NSC5 361 aa21.3■■□□□ 1
USP39-204ENST00000409766 ITGA11Q9UKX5 1188 aa21.3■■□□□ 1
USP39-204ENST00000409766 STRIP2Q9ULQ0 834 aa21.3■■□□□ 1
USP39-204ENST00000409766 AGAP1Q9UPQ3 857 aa21.3■■□□□ 1
USP39-204ENST00000409766 GNEQ9Y223 722 aaKnown RBP21.3■■□□□ 1
USP39-204ENST00000409766 TRIP11Q15643 1979 aa21.3■■□□□ 1
USP39-204ENST00000409766 F8VP50 259 aa21.29■■□□□ 1
USP39-204ENST00000409766 GRM5P41594 1212 aa21.29■■□□□ 1
USP39-204ENST00000409766 PMS2P54278 862 aa21.29■■□□□ 1
USP39-204ENST00000409766 KRT17Q04695 432 aa21.29■■□□□ 1
USP39-204ENST00000409766 PTPN11Q06124 597 aaPredicted RBP21.29■■□□□ 1
USP39-204ENST00000409766 ORC1Q13415 861 aa21.29■■□□□ 1
USP39-204ENST00000409766 PIGHQ14442 188 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms