RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 KCNG4Q8TDN1 519 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 CACTINQ8WUQ7 758 aaKnown RBP15.92■□□□□ 0.14
CBX3-203ENST00000409747 ZSWIM3Q96MP5 696 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 ZNF396Q96N95 335 aaPredicted RBP15.92■□□□□ 0.14
CBX3-203ENST00000409747 FAM213AQ9BRX8 229 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 ZCWPW1Q9H0M4 648 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 PANK4Q9NVE7 773 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 SLC27A5Q9Y2P5 690 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 COL4A3Q01955 1670 aa15.92■□□□□ 0.14
CBX3-203ENST00000409747 A0A1W2PRU2 124 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 KPNA7A9QM74 516 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 ZNF263O14978 683 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 GJA1P17302 382 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 CD72P21854 359 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 GDI1P31150 447 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 SLC39A12Q504Y0 691 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 ARHGAP15Q53QZ3 475 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 MFSD6LQ8IWD5 586 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 YAF2Q8IY57 180 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 FAM200AQ8TCP9 573 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 SPPL2BQ8TCT7 592 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 CLDN23Q96B33 292 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 MSANTD3Q96H12 275 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 GCNAQ96QF7 691 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 TMEM209Q96SK2 561 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 SEPT5Q99719 369 aaPredicted RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 LRRC3Q9BY71 257 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 TNMDQ9H2S6 317 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 CUEDC2Q9H467 287 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 RBAKQ9NYW8 714 aaPredicted RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 MTF2Q9Y483 593 aaPredicted RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 R4GN57 208 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 SCN1AP35498 2009 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 KIAA0391O15091 583 aaKnown RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 PDIA4P13667 645 aaKnown RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 TARSP26639 723 aaKnown RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 TFAMQ00059 246 aaKnown RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 KCNA1Q09470 495 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 MGAT5BQ3V5L5 792 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 C1orf228Q6PIY5 440 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 DNAJB7Q7Z6W7 309 aaPredicted RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 DCP1BQ8IZD4 617 aaKnown RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 LINC00301Q8NCQ3 95 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 IER2Q9BTL4 223 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 PANK2Q9BZ23 570 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 IKZF4Q9H2S9 585 aa15.91■□□□□ 0.14
CBX3-203ENST00000409747 ZNF334Q9HCZ1 680 aaPredicted RBP15.91■□□□□ 0.14
CBX3-203ENST00000409747 COL4A2P08572 1712 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 HEPACAM2A8MVW5 462 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 NRG2O14511 850 aaPredicted RBP15.9■□□□□ 0.14
CBX3-203ENST00000409747 SPTLC2O15270 562 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 EXTL3O43909 919 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 PPP6R2O75170 966 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 VIPR2P41587 438 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 CASP5P51878 434 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 TSPY1Q01534 308 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 TAF12Q16514 161 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 PDILTQ8N807 584 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 SAAL1Q96ER3 474 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 ATXN3LQ9H3M9 355 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 ZMYM5Q9UJ78 669 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 ITGA11Q9UKX5 1188 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 FANCMQ8IYD8 2048 aa15.9■□□□□ 0.14
CBX3-203ENST00000409747 NUP210Q8TEM1 1887 aaPredicted RBP15.89■□□□□ 0.13
CBX3-203ENST00000409747 A0A087X0B3 334 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 TULP1O00294 542 aaPredicted RBP15.89■□□□□ 0.13
CBX3-203ENST00000409747 KINO60870 393 aaKnown RBP15.89■□□□□ 0.13
CBX3-203ENST00000409747 GABRR2P28476 465 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 CDC25CP30307 473 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 MLLT6P55198 1093 aaPredicted RBP15.89■□□□□ 0.13
CBX3-203ENST00000409747 AMPD3Q01432 767 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 WSCD1Q658N2 575 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 MAML2Q8IZL2 1156 aaPredicted RBP15.89■□□□□ 0.13
CBX3-203ENST00000409747 TTC9BQ8N6N2 239 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 LRRC52Q8N7C0 313 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 CSGALNACT1Q8TDX6 532 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 PIAS3Q9Y6X2 628 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 TICRRQ7Z2Z1 1910 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 FAM186AA6NE01 2351 aa15.89■□□□□ 0.13
CBX3-203ENST00000409747 RIF1Q5UIP0 2472 aaKnown RBP15.89■□□□□ 0.13
CBX3-203ENST00000409747 WDR87Q6ZQQ6 2873 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 DPYSL4O14531 572 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 CHADO15335 359 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 SOAT2O75908 522 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 YEATS4O95619 227 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 ITGB3P05106 788 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 POLR2BP30876 1174 aaKnown RBP15.88■□□□□ 0.13
CBX3-203ENST00000409747 FCHO2Q0JRZ9 810 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 PPP2R5DQ14738 602 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 GPD1LQ8N335 351 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 FAM3CQ92520 227 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 OBP2AQ9NY56 170 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 AGAP1Q9UPQ3 857 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 R3HCC1Q9Y3T6 440 aaKnown RBP15.88■□□□□ 0.13
CBX3-203ENST00000409747 PCDHGA2Q9Y5H1 932 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 FRYLO94915 3013 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 HUS1O60921 280 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 TMEM191BP0C7N4 346 aa15.88■□□□□ 0.13
CBX3-203ENST00000409747 ATF6P18850 670 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms